Basic Information:

  VIRBase ID:  

VHID00479091

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-10a-5p:  MIMAT0015212          UNC119:  NM_054035     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-10a-5p	UNC119
miRBase Accession/Entrez ID	MIMAT0015212	9094
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HRG4//IMD13//POC7//POC7A

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	UNC119	chr17:26873742-26873743(-) m6A 3'UTR       24981863 chr17:26873767-26873768(-) m6A 3'UTR       24981863 chr17:26873801-26873802(-) m6A 3'UTR       24981863 chr17:26873824-26873825(-) m6A 3'UTR       24981863 chr17:26874197-26874198(-) m6A 3'UTR       24284625 chr17:26874322-26874323(-) m6A 3'UTR//CDS       24284625//27773535 chr17:26874339-26874340(-) m6A 3'UTR//CDS       24284625//27773535 chr17:26874397-26874398(-) m6A 3'UTR//CDS       27773535 chr17:26874622-26874623(-) m6A 3'UTR//intron       25456834//27371828 chr17:26874645-26874646(-) m6A 3'UTR//CDS//intron       25456834//27371828 chr17:26874741-26874742(-) m6A 3'UTR//CDS//exon       27773535//27371828 chr17:26874846-26874847(-) m6A CDS//exon       27773535 chr17:26879562-26879563(-) m1A CDS//exon       26863410

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	UNC119	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-10a-5p
Interactor2: UNC119

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg