Basic Information:

  VIRBase ID:  

VHID00477503

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-12-5p:  MIMAT0003712          NPAS4:  NM_001318804     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-12-5p	NPAS4
miRBase Accession/Entrez ID	MIMAT0003712	266743
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bHLHe79//Le-PAS//NXF//PASD10

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NPAS4	chr11:66192300-66192301(+) m6A 3'UTR//CDS       25456834 chr11:66192334-66192335(+) m6A 3'UTR//CDS       25456834 chr11:66192352-66192353(+) m6A 3'UTR//CDS       25456834 chr11:66192366-66192367(+) m6A 3'UTR//CDS       25456834 chr11:66192414-66192415(+) m6A 3'UTR//CDS       25456834 chr11:66192421-66192422(+) m6A 3'UTR//CDS       25456834 chr11:66192444-66192445(+) m6A 3'UTR//CDS       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-12-5p	Exosome Primary dendritic cells     21505438

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-12-5p
Interactor2: NPAS4

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg