Basic Information:

  VIRBase ID:  

VHID00476922

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-12-5p:  MIMAT0003712          PIFO:  NR_125338     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-12-5p	PIFO
miRBase Accession/Entrez ID	MIMAT0003712	128344
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C1orf88//pitchfork

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PIFO	chr1:111892830-111892831(+) m6A CDS//exon       24209618 chr1:111893890-111893891(+) m6A CDS//exon       24209618 chr1:111893896-111893897(+) m6A CDS//exon       24209618 chr1:111893914-111893915(+) m6A CDS//exon       - chr1:111893988-111893989(+) m6A 3'UTR//exon       - chr1:111893998-111893999(+) m6A 3'UTR//exon       - chr1:111894005-111894006(+) m6A 3'UTR//exon       - chr1:111894073-111894074(+) m6A 3'UTR//exon       25456834 chr1:111894100-111894101(+) m6A 3'UTR//exon       25456834 chr1:111894108-111894109(+) m6A 3'UTR//exon       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-12-5p	Exosome Primary dendritic cells     21505438
	PIFO	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-12-5p
Interactor2: PIFO

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg