Basic Information:

  VIRBase ID:  

VHID00476079

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-12-5p:  MIMAT0003712          SLC66A2:  NM_001146345     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-12-5p	SLC66A2
miRBase Accession/Entrez ID	MIMAT0003712	80148
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PQLC1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC66A2	chr18:77708433(-) A-I      intronic chr18:77708462(-) A-I      intronic chr18:77708453(-) A-I      intronic chr18:77708523(-) A-I      intronic chr18:77698041(-) A-I      intronic chr18:77708438(-) A-I      intronic chr18:77708505(-) A-I      intronic chr18:77710277(-) A-I      intronic chr18:77691905(-) A-I      intronic chr18:77698872(-) A-I      intronic chr18:77708632(-) A-I      intronic chr18:77708500(-) A-I      intronic chr18:77708479(-) A-I      intronic chr18:77698871(-) A-I      intronic chr18:77708520(-) A-I      intronic chr18:77710355(-) A-I      intronic chr18:77710085(-) A-I      intronic chr18:77708553(-) A-I      intronic chr18:77706882(-) A-I      intronic chr18:77709602(-) A-I      ncRNA

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-12-5p	Exosome Primary dendritic cells     21505438
	SLC66A2	Cytosol HCC cell line (HepG2)     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-12-5p
Interactor2: SLC66A2

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg