Basic Information:

  VIRBase ID:  

VHID00475770

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-12-5p:  MIMAT0003712          CLEC7A:  NR_125336     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-12-5p	CLEC7A
miRBase Accession/Entrez ID	MIMAT0003712	64581
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BGR//CANDF4//CD369//CLECSF12//DECTIN1//SCARE2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CLEC7A	chr12:10270690(-) A-I      3'UTR chr12:10270694(-) A-I      3'UTR chr12:10270693(-) A-I      3'UTR chr12:10275089(-) A-I      intronic chr12:10275293(-) A-I      intronic chr12:10280588(-) A-I      intronic chr12:10274507(-) A-I      intronic chr12:10273426(-) A-I      intronic chr12:10273357(-) A-I      intronic chr12:10275385(-) A-I      intronic chr12:10274495(-) A-I      intronic chr12:10273351(-) A-I      intronic chr12:10275084(-) A-I      intronic chr12:10273608(-) A-I      intronic chr12:10275209(-) A-I      intronic chr12:10270736(-) A-I      3'UTR chr12:10270556(-) A-I      3'UTR chr12:10270680(-) A-I      3'UTR chr12:10270608(-) A-I      3'UTR chr12:10280592(-) A-I      intronic chr12:10276104(-) A-I      intronic chr12:10273593(-) A-I      intronic chr12:10273592(-) A-I      intronic chr12:10273491(-) A-I      intronic chr12:10276102(-) A-I      intronic chr12:10282381(-) A-I      intronic chr12:10273555(-) A-I      intronic chr12:10273490(-) A-I      intronic chr12:10273459(-) A-I      intronic chr12:10273609(-) A-I      intronic chr12:10270795(-) A-I      3'UTR chr12:10270544(-) A-I      3'UTR chr12:10270742(-) A-I      3'UTR

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-12-5p	Exosome Primary dendritic cells     21505438
	CLEC7A	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-12-5p
Interactor2: CLEC7A

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg