Basic Information:

  VIRBase ID:  

VHID00475149

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-12-5p:  MIMAT0003712          HAUS2:  NM_001323630     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-12-5p	HAUS2
miRBase Accession/Entrez ID	MIMAT0003712	55142
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C15orf25//CEP27//HsT17025

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HAUS2	chr15:42859544(+) A-I      3'UTR chr15:42859559(+) A-I      3'UTR chr15:42859383(+) A-I      3'UTR chr15:42859427(+) A-I      3'UTR chr15:42859429(+) A-I      3'UTR chr15:42859447(+) A-I      3'UTR chr15:42859460(+) A-I      3'UTR chr15:42842425(+) A-I      intronic chr15:42860093(+) A-I      3'UTR chr15:42860061(+) A-I      3'UTR chr15:42861568(+) A-I      3'UTR chr15:42861690(+) A-I      3'UTR chr15:42860060(+) A-I      3'UTR chr15:42859501(+) A-I      3'UTR chr15:42859967(+) A-I      3'UTR chr15:42859388(+) A-I      3'UTR chr15:42859540(+) A-I      3'UTR chr15:42859495(+) A-I      3'UTR chr15:42859488(+) A-I      3'UTR chr15:42859882(+) A-I      3'UTR chr15:42848663(+) A-I      intronic chr15:42848643(+) A-I      intronic chr15:42848184(+) A-I      intronic chr15:42847517(+) A-I      intronic chr15:42846806(+) A-I      intronic chr15:42845302(+) A-I      intronic chr15:42845288(+) A-I      intronic chr15:42844338(+) A-I      intronic chr15:42844324(+) A-I      intronic chr15:42843823(+) A-I      intronic chr15:42843780(+) A-I      intronic chr15:42843686(+) A-I      intronic chr15:42843680(+) A-I      intronic chr15:42843677(+) A-I      intronic chr15:42843674(+) A-I      intronic chr15:42843663(+) A-I      intronic chr15:42841829(+) A-I      intronic chr15:42857218(+) A-I      intronic chr15:42856892(+) A-I      intronic chr15:42841745(+) A-I      intronic chr15:42842400(+) A-I      intronic chr15:42848513(+) A-I      intronic chr15:42852002(+) A-I      intronic chr15:42852155(+) A-I      intronic chr15:42857064(+) A-I      intronic chr15:42857090(+) A-I      intronic chr15:42857309(+) A-I      intronic chr15:42852102(+) A-I      intronic chr15:42843326(+) A-I      intronic chr15:42848421(+) A-I      intronic chr15:42852219(+) A-I      intronic chr15:42856268(+) A-I      intronic chr15:42852920(+) A-I      intronic chr15:42852015(+) A-I      intronic chr15:42856956(+) A-I      intronic chr15:42857098(+) A-I      intronic chr15:42852232(+) A-I      intronic chr15:42850590(+) A-I      intronic chr15:42856288(+) A-I      intronic chr15:42843799(+) A-I      intronic chr15:42843736(+) A-I      intronic chr15:42850562(+) A-I      intronic chr15:42849174(+) A-I      intronic chr15:42849143(+) A-I      intronic chr15:42849139(+) A-I      intronic chr15:42849059(+) A-I      intronic chr15:42843759(+) A-I      intronic chr15:42849057(+) A-I      intronic chr15:42849002(+) A-I      intronic chr15:42848948(+) A-I      intronic chr15:42859449(+) A-I      3'UTR chr15:42859396(+) A-I      3'UTR chr15:42860075(+) A-I      3'UTR chr15:42859384(+) A-I      3'UTR chr15:42859378(+) A-I      3'UTR chr15:42861705(+) A-I      3'UTR chr15:42859343(+) A-I      3'UTR chr15:42860202(+) A-I      3'UTR chr15:42859864(+) A-I      3'UTR chr15:42859922(+) A-I      3'UTR chr15:42861622(+) A-I      3'UTR chr15:42861604(+) A-I      3'UTR chr15:42861579(+) A-I      3'UTR chr15:42860159(+) A-I      3'UTR chr15:42859736(+) A-I      3'UTR chr15:42859751(+) A-I      3'UTR chr15:42859782(+) A-I      3'UTR chr15:42859349(+) A-I      3'UTR chr15:42859892(+) A-I      3'UTR chr15:42859382(+) A-I      3'UTR chr15:42861517(+) A-I      3'UTR chr15:42859891(+) A-I      3'UTR chr15:42859765(+) A-I      3'UTR chr15:42860083(+) A-I      3'UTR chr15:42861524(+) A-I      3'UTR chr15:42859436(+) A-I      3'UTR chr15:42861537(+) A-I      3'UTR chr15:42860067(+) A-I      3'UTR chr15:42861609(+) A-I      3'UTR chr15:42861634(+) A-I      3'UTR chr15:42859963(+) A-I      3'UTR chr15:42859944(+) A-I      3'UTR chr15:42861646(+) A-I      3'UTR chr15:42861660(+) A-I      3'UTR chr15:42859842(+) A-I      3'UTR chr15:42861671(+) A-I      3'UTR chr15:42859903(+) A-I      3'UTR chr15:42860228(+) A-I      3'UTR chr15:42860134(+) A-I      3'UTR chr15:42860135(+) A-I      3'UTR chr15:42859514(+) A-I      3'UTR chr15:42860116(+) A-I      3'UTR chr15:42859750(+) A-I      3'UTR chr15:42860103(+) A-I      3'UTR chr15:42859745(+) A-I      3'UTR chr15:42859740(+) A-I      3'UTR chr15:42860146(+) A-I      3'UTR chr15:42859646(+) A-I      3'UTR chr15:42859583(+) A-I      3'UTR chr15:42860155(+) A-I      3'UTR chr15:42859484(+) A-I      3'UTR chr15:42857133(+) A-I      intronic chr15:42852952(+) A-I      intronic chr15:42858145(+) A-I      intronic chr15:42843700(+) A-I      intronic chr15:42841786(+) A-I      intronic chr15:42856353(+) A-I      intronic chr15:42842406(+) A-I      intronic chr15:42846872(+) A-I      intronic chr15:42852101(+) A-I      intronic chr15:42850900(+) A-I      intronic chr15:42856396(+) A-I      intronic chr15:42850898(+) A-I      intronic chr15:42856293(+) A-I      intronic chr15:42857159(+) A-I      intronic chr15:42841784(+) A-I      intronic chr15:42850969(+) A-I      intronic chr15:42850970(+) A-I      intronic chr15:42844360(+) A-I      intronic chr15:42848555(+) A-I      intronic chr15:42850606(+) A-I      intronic chr15:42848947(+) A-I      intronic chr15:42843351(+) A-I      intronic chr15:42841774(+) A-I      intronic chr15:42843420(+) A-I      intronic chr15:42842390(+) A-I      intronic chr15:42856244(+) A-I      intronic chr15:42852259(+) A-I      intronic chr15:42847563(+) A-I      intronic chr15:42844321(+) A-I      intronic chr15:42851410(+) A-I      intronic chr15:42850878(+) A-I      intronic chr15:42856278(+) A-I      intronic chr15:42849258(+) A-I      intronic chr15:42856916(+) A-I      intronic chr15:42845285(+) A-I      intronic chr15:42856195(+) A-I      intronic chr15:42858239(+) A-I      intronic chr15:42851955(+) A-I      intronic chr15:42842323(+) A-I      intronic chr15:42851035(+) A-I      intronic chr15:42845486(+) A-I      intronic chr15:42841832(+) A-I      intronic chr15:42842392(+) A-I      intronic chr15:42850974(+) A-I      intronic chr15:42852310(+) A-I      intronic chr15:42851441(+) A-I      intronic chr15:42846828(+) A-I      intronic chr15:42849122(+) A-I      intronic chr15:42857160(+) A-I      intronic chr15:42846911(+) A-I      intronic chr15:42843653(+) A-I      intronic chr15:42856343(+) A-I      intronic chr15:42849257(+) A-I      intronic chr15:42843702(+) A-I      intronic chr15:42850901(+) A-I      intronic chr15:42856908(+) A-I      intronic chr15:42851394(+) A-I      intronic chr15:42850665(+) A-I      intronic chr15:42843708(+) A-I      intronic chr15:42848053(+) A-I      intronic chr15:42848685(+) A-I      intronic chr15:42851081(+) A-I      intronic chr15:42857257(+) A-I      intronic chr15:42843826(+) A-I      intronic chr15:42850655(+) A-I      intronic chr15:42841762(+) A-I      intronic chr15:42845262(+) A-I      intronic chr15:42844424(+) A-I      intronic chr15:42842421(+) A-I      intronic chr15:42861670(+) A-I      3'UTR chr15:42859342(+) A-I      3'UTR chr15:42860030(+) A-I      3'UTR chr15:42861781(+) A-I      3'UTR chr15:42861688(+) A-I      3'UTR chr15:42859586(+) A-I      3'UTR chr15:42859519(+) A-I      3'UTR chr15:42859739(+) A-I      3'UTR chr15:42861739(+) A-I      3'UTR chr15:42859452(+) A-I      3'UTR chr15:42861541(+) A-I      3'UTR chr15:42861757(+) A-I      3'UTR chr15:42859896(+) A-I      3'UTR chr15:42859749(+) A-I      3'UTR chr15:42859870(+) A-I      3'UTR chr15:42859992(+) A-I      3'UTR chr15:42859478(+) A-I      3'UTR chr15:42860058(+) A-I      3'UTR chr15:42859402(+) A-I      3'UTR chr15:42860107(+) A-I      3'UTR chr15:42859638(+) A-I      3'UTR chr15:42859987(+) A-I      3'UTR chr15:42859986(+) A-I      3'UTR chr15:42861515(+) A-I      3'UTR chr15:42861779(+) A-I      3'UTR chr15:42861650(+) A-I      3'UTR chr15:42861521(+) A-I      3'UTR chr15:42859348(+) A-I      3'UTR chr15:42861598(+) A-I      3'UTR chr15:42859336(+) A-I      3'UTR chr15:42859397(+) A-I      3'UTR chr15:42859373(+) A-I      3'UTR chr15:42860080(+) A-I      3'UTR chr15:42861617(+) A-I      3'UTR chr15:42861529(+) A-I      3'UTR chr15:42859628(+) A-I      3'UTR chr15:42859541(+) A-I      3'UTR chr15:42861740(+) A-I      3'UTR chr15:42860063(+) A-I      3'UTR chr15:42861584(+) A-I      3'UTR chr15:42861679(+) A-I      3'UTR chr15:42861657(+) A-I      3'UTR chr15:42859921(+) A-I      3'UTR chr15:42859754(+) A-I      3'UTR chr15:42861694(+) A-I      3'UTR chr15:42860120(+) A-I      3'UTR chr15:42859518(+) A-I      3'UTR chr15:42859470(+) A-I      3'UTR chr15:42861516(+) A-I      3'UTR chr15:42859505(+) A-I      3'UTR chr15:42859438(+) A-I      3'UTR chr15:42860094(+) A-I      3'UTR chr15:42859895(+) A-I      3'UTR chr15:42859506(+) A-I      3'UTR chr15:42860139(+) A-I      3'UTR chr15:42861631(+) A-I      3'UTR chr15:42859647(+) A-I      3'UTR chr15:42861591(+) A-I      3'UTR chr15:42861630(+) A-I      3'UTR chr15:42861696(+) A-I      3'UTR chr15:42861714(+) A-I      3'UTR chr15:42861064(+) A-I      3'UTR chr15:42859948(+) A-I      3'UTR chr15:42861767(+) A-I      3'UTR chr15:42861644(+) A-I      3'UTR chr15:42861741(+) A-I      3'UTR chr15:42861605(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	HAUS2	chr15:42856195(+) A-I intron -    15258596 chr15:42856268(+) A-I intron -    15258596 chr15:42856278(+) A-I intron -    15258596 chr15:42856288(+) A-I intron -    15258596 chr15:42856293(+) A-I intron -    15258596 chr15:42856343(+) A-I intron -    15258596 chr15:42856396(+) A-I intron -    15258596 chr15:42860058(+) A-I exon 3'UTR    15258596 chr15:42860080(+) A-I exon 3'UTR    15258596 chr15:42860094(+) A-I exon 3'UTR    15258596 chr15:42860107(+) A-I exon 3'UTR    15258596 chr15:42861521(+) A-I exon 3'UTR    15258596 chr15:42861604(+) A-I exon 3'UTR    15258596 chr15:42861605(+) A-I exon 3'UTR    15258596 chr15:42861617(+) A-I exon 3'UTR    15258596 chr15:42859342(+) A-I intron -    21960545   //22327324 chr15:42859343(+) A-I intron -    22327324 chr15:42859382(+) A-I intron -    21960545   //22327324 chr15:42859506(+) A-I intron -    21960545   //22327324 chr15:42859922(+) A-I intron -    22327324 chr15:42861579(+) A-I intron -    22327324 chr15:42861739(+) A-I intron -    22327324 chr15:42859505(+) A-I intron -    21960545 chr15:42859382(+) A-G intron -    21725310   //22484847 chr15:42859922(+) A-G intron -    21725310   //22484847 chr15:42860080(+) A-G intron -    21725310   //22484847 chr15:42861605(+) A-G intron -    21725310   //22484847 chr15:42861740(+) A-G intron -    21725310   //22484847 chr15:42856343(+) A-G intron -    22484847 chr15:42859342(+) A-G intron -    22484847 chr15:42859343(+) A-G intron -    22484847 chr15:42859349(+) A-G intron -    22484847 chr15:42859436(+) A-G intron -    22484847 chr15:42859452(+) A-G intron -    22484847 chr15:42859470(+) A-G intron -    22484847 chr15:42859478(+) A-G intron -    22484847 chr15:42859505(+) A-G intron -    22484847 chr15:42859506(+) A-G intron -    22484847 chr15:42859518(+) A-G intron -    22484847 chr15:42859751(+) A-G intron -    22484847 chr15:42859754(+) A-G intron -    22484847 chr15:42859782(+) A-G intron -    22484847 chr15:42859986(+) A-G intron -    22484847 chr15:42860094(+) A-G intron -    22484847 chr15:42860202(+) A-G intron -    22484847 chr15:42861493(+) T-C intron -    22484847 chr15:42861495(+) C-T intron -    22484847 chr15:42861584(+) A-G intron -    22484847 chr15:42861604(+) A-G intron -    22484847 chr15:42861617(+) A-G intron -    22484847 chr15:42861630(+) A-G intron -    22484847 chr15:42861631(+) A-G intron -    22484847 chr15:42861644(+) A-G intron -    22484847 chr15:42861705(+) A-G intron -    22484847 chr15:42861739(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HAUS2	chr15:42841092-42841093(+) m6A CDS       24981863 chr15:42859962-42859963(+) m6A 3'UTR       24981863 chr15:42860031-42860032(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-12-5p	Exosome Primary dendritic cells     21505438
	HAUS2	Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-12-5p
Interactor2: HAUS2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg