Basic Information:

  VIRBase ID:  

VHID00474591

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-12-5p:  MIMAT0003712          FOXD3:  NM_012183     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-12-5p	FOXD3
miRBase Accession/Entrez ID	MIMAT0003712	27022
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AIS1//Genesis//HFH2//VAMAS2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FOXD3	chr1:63788799-63788800(+) m6A CDS       25456834//24981863//22608085 chr1:63788844-63788845(+) m6A CDS       25456834//24981863//22608085 chr1:63788935-63788936(+) m6A CDS       25456834//24981863//27773536//22608085 chr1:63789001-63789002(+) m6A CDS       25456834//24981863//22608085 chr1:63789288-63789289(+) m6A CDS       25456834//24981863//22608085 chr1:63789374-63789375(+) m6A CDS       25456834//24981863//22608085 chr1:63789381-63789382(+) m6A CDS       25456834//24981863//22608085 chr1:63789396-63789397(+) m6A CDS       25456834//24981863//22608085 chr1:63789535-63789536(+) m6A CDS       25456834//24981863//22608085 chr1:63789992-63789993(+) m6A CDS       25456834 chr1:63790090-63790091(+) m6A CDS       25456834//24981863//22608085 chr1:63790185-63790186(+) m6A 3'UTR       25456834//24981863//22608085 chr1:63790279-63790280(+) m6A 3'UTR       25456834//24981863//22608085 chr1:63790373-63790374(+) m6A 3'UTR       25456834//24981863//22608085 chr1:63790416-63790417(+) m6A 3'UTR       25456834//22608085 chr1:63790423-63790424(+) m6A 3'UTR       25456834//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-12-5p	Exosome Primary dendritic cells     21505438
	FOXD3	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-12-5p
Interactor2: FOXD3

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg