Basic Information:

  VIRBase ID:  

VHID00472704

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-12-5p:  MIMAT0003712          CXCL5:  NM_002994     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-12-5p	CXCL5
miRBase Accession/Entrez ID	MIMAT0003712	6374
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ENA-78//SCYB5

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CXCL5	chr4:74861363-74861364(-) m6A 3'UTR       27773535 chr4:74861381-74861382(-) m6A 3'UTR       27773535 chr4:74863272-74863273(-) m6A 3'UTR       26404942 chr4:74863283-74863284(-) m6A 3'UTR       26404942 chr4:74864331-74864332(-) m6A 5'UTR       25456834//24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-12-5p	Exosome Primary dendritic cells     21505438
	CXCL5	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-12-5p
Interactor2: CXCL5

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg