Detail

Detail Information

Basic Information:

VIRBase ID:

VHID00470950

Virus:

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

Host:

Homo sapiens

Confidence Score:

0.8589

Interaction Type:

Virus-Host interaction

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-3-3p	CAECAM1
miRBase Accession/Entrez ID	MIMAT0002194	CAECAM1
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-3-3p

Interactor2: CAECAM1

Evidence Support:

Strong-Evidence	qPCR
Weak-Evidence	Microarray
Support Database	ViRBase

References:

PMID	29550353	Target region	None
Source	ViRBase	Interactor1 expression	Upregulation
Tissue or cell line	HOK cells	Interactor2 expression	Upregulation
Description	Figure 2.Differential expression of host genes in miR-H1 and miR-K12-3-3p transfected HOK.(D) Validation of selected differentially expressed genes by quantitative RT-PCR in a second cohort of HOK cultures. Total RNA isolated from miR-H1, miR-K12-3-3p and control transfected HOK were analyzed for the expression of differentially expressed genes by quantitative RT-PCR.

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