Basic Information:
VIRBase ID: VHID00470789
Virus: Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)
Host: Homo sapiens
Confidence Score: 0.5908
Interaction Type: Virus-Host interaction
Predicted Binding:
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Interactor Information:
Interactor1
Interactor2
Symbol
kshv-miR-K12-3-3p
PRKAA1
miRBase Accession/Entrez ID
MIMAT0002194
5562
Organism
Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)
Homo sapiens
Category
miRNA
mRNA
Alias
-
AMPK//AMPKa1
RNA Editing:
Resource
Symbol
Editing Position
Change
Genetic Region
RADAR
PRKAA1
Resource
Symbol
Editing Position
Change
SeqReg
exReg
PMID
DARNED
PRKAA1
RNA Modification:
Resource
Symbol
ModificationPosition
Type
Genomic Context
PMID
RMBase
PRKAA1
RNA Localization:
Resource
Symbol
Subcellular Localization
Tissue or Cell Line
PMID
RNALocate
PRKAA1
Interaction Network (The top 100 interactions) :
Interactor1: kshv-miR-K12-3-3p
Interactor2: PRKAA1
Evidence Support:
Weak-Evidence
PAR-CLIP
Prediction-Evidence
miRanda//Targetscan
Support Database
VIRmiRNA//VmiReg
References:
PMID
22100165
Target region
3'UTR
Source
VIRmiRNA//VmiReg
Interactor1 expression
None
Tissue or cell line
BC-1 cells//BC-3 cells//BCBL-1 cells
Interactor2 expression
None
Description
Bioinformatics and luciferase reporter analyses showed that two of the HSV-1-downregulated cellular miRNAs, miR-498 and miR-320d, directly targeted the 3'untranslated region (UTR) of KSHV RTA.