Basic Information:

  VIRBase ID:  

VHID00470604

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-3-5p:  MIMAT0002193          RGS9BP:  NM_207391     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-3-5p	RGS9BP
miRBase Accession/Entrez ID	MIMAT0002193	388531
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PERRS//R9AP//RGS9

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RGS9BP	chr19:33166524-33166525(+) m6A 5'UTR       22608085 chr19:33166619-33166620(+) m6A 5'UTR       22608085 chr19:33166750-33166751(+) m6A 5'UTR       22608085 chr19:33166841-33166842(+) m6A 5'UTR       22608085 chr19:33166894-33166895(+) m6A 5'UTR       22608085 chr19:33166947-33166948(+) m6A 5'UTR       22608085 chr19:33167050-33167051(+) m6A 5'UTR       22608085 chr19:33167263-33167264(+) m6A CDS       24284625//22608085 chr19:33167272-33167273(+) m6A CDS       24981863//22608085 chr19:33167880-33167881(+) m6A 3'UTR       24981863//22608085 chr19:33167926-33167927(+) m6A 3'UTR       24981863//22608085 chr19:33167975-33167976(+) m6A 3'UTR       24284625//24981863//22608085 chr19:33168030-33168031(+) m6A 3'UTR       24284625//22608085 chr19:33168131-33168132(+) m6A 3'UTR       24284625 chr19:33168254-33168255(+) m6A 3'UTR       - chr19:33168556-33168557(+) m6A 3'UTR       - chr19:33168575-33168576(+) m6A 3'UTR       - chr19:33168589-33168590(+) m6A 3'UTR       22608085 chr19:33168699-33168700(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-3-5p	Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438 Exosome KSHV-infected lymphoma cell lines (BCBL-1|TY-1)     27611973 Exosome K562 cells     24460325
	RGS9BP	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-3-5p
Interactor2: RGS9BP

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg