Basic Information:

  VIRBase ID:  

VHID00470547

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-3-5p:  MIMAT0002193          NCCRP1:  NM_001001414     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-3-5p	NCCRP1
miRBase Accession/Entrez ID	MIMAT0002193	342897
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FBXO50//NCCRP-1

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NCCRP1	chr19:39691977(+) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NCCRP1	chr19:39691512-39691513(+) m6A 3'UTR       22575960 chr19:39691539-39691540(+) m6A 3'UTR       22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-3-5p	Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438 Exosome KSHV-infected lymphoma cell lines (BCBL-1|TY-1)     27611973 Exosome K562 cells     24460325
	NCCRP1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-3-5p
Interactor2: NCCRP1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg