Basic Information:

  VIRBase ID:  

VHID00470503

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-3-5p:  MIMAT0002193          MICU3:  NM_001349810     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-3-5p	MICU3
miRBase Accession/Entrez ID	MIMAT0002193	286097
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	EFHA2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MICU3	chr8:16886917(+) A-I      intronic chr8:16931669(+) A-I      intronic chr8:16896230(+) A-I      intronic chr8:16888928(+) A-I      intronic chr8:16889033(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MICU3	chr8:16977807-16977808(+) m6A 3'UTR       24981863 chr8:16977942-16977943(+) m6A 3'UTR       24981863 chr8:16977955-16977956(+) m6A 3'UTR       24981863 chr8:16977962-16977963(+) m6A 3'UTR       24981863 chr8:16978036-16978037(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-3-5p	Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438 Exosome KSHV-infected lymphoma cell lines (BCBL-1|TY-1)     27611973 Exosome K562 cells     24460325
	MICU3	Cytosol HCC cell line (HepG2)     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-3-5p
Interactor2: MICU3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg