Basic Information:

  VIRBase ID:  

VHID00468706

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-3-5p:  MIMAT0002193          TIMM10:  NM_012456     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-3-5p	TIMM10
miRBase Accession/Entrez ID	MIMAT0002193	26519
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	TIM10//TIM10A//TIMM10A

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TIMM10	chr11:57295954-57295955(-) m6A 3'UTR       27773535 chr11:57296103-57296104(-) m6A 3'UTR       24284625//27773535 chr11:57296283-57296284(-) m6A CDS       27773535 chr11:57296307-57296308(-) m6A CDS       27773535 chr11:57298248-57298249(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-3-5p	Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438 Exosome KSHV-infected lymphoma cell lines (BCBL-1|TY-1)     27611973 Exosome K562 cells     24460325
	TIMM10	Cytosol K562 cells     - Exosome Blood     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-3-5p
Interactor2: TIMM10

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg