Basic Information:

  VIRBase ID:  

VHID00467185

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-3-5p:  MIMAT0002193          IL1B:  NM_000576     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-3-5p	IL1B
miRBase Accession/Entrez ID	MIMAT0002193	3553
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	IL-1//IL1-BETA//IL1beta//IL1F2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	IL1B	chr2:113590257-113590258(-) m6A CDS//exon       - chr2:113590281-113590282(-) m6A CDS//exon       - chr2:113593136-113593137(-) m6A exon//intron       27371828 chr2:113593151-113593152(-) m6A CDS//exon       27371828 chr2:113594350-113594351(-) m6A 5'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-3-5p	Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438 Exosome KSHV-infected lymphoma cell lines (BCBL-1|TY-1)     27611973 Exosome K562 cells     24460325
	IL1B	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-3-5p
Interactor2: IL1B

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg