Basic Information:

  VIRBase ID:  

VHID00465362

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-4-3p:  MIMAT0002192          SEMA4G:  NR_172054     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-4-3p	SEMA4G
miRBase Accession/Entrez ID	MIMAT0002192	57715
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SEMA4G	chr10:102736343(+) A-I      intronic chr10:102736333(+) A-I      intronic chr10:102734119(+) A-I      intronic chr10:102733555(+) A-I      intronic chr10:102733733(+) A-I      intronic chr10:102734021(+) A-I      intronic chr10:102733997(+) A-I      intronic chr10:102734003(+) A-I      intronic chr10:102735643(+) A-I      intronic chr10:102735578(+) A-I      intronic chr10:102735563(+) A-I      intronic chr10:102734022(+) A-I      intronic chr10:102736147(+) A-I      intronic chr10:102734171(+) A-I      intronic chr10:102734101(+) A-I      intronic chr10:102733603(+) A-I      intronic chr10:102733994(+) A-I      intronic chr10:102733605(+) A-I      intronic chr10:102736283(+) A-I      intronic chr10:102733669(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SEMA4G	chr10:102729540-102729541(+) m6A 5'UTR//exon//intron       25456834//27371828 chr10:102729562-102729563(+) m6A 5'UTR//exon//intron       25456834//27371828 chr10:102729591-102729592(+) m6A 5'UTR//exon//intron       27371828 chr10:102732499-102732500(+) m6A 5'UTR//exon//intron       24209618//24981863 chr10:102732571-102732572(+) m6A 5'UTR//exon//intron       24981863 chr10:102738862-102738863(+) m6A CDS//exon       27371828//22608085 chr10:102741146-102741147(+) m6A exon//intron       27773535 chr10:102741172-102741173(+) m6A exon//intron       27773535 chr10:102743081-102743082(+) m6A CDS//intron       27773535 chr10:102743392-102743393(+) m6A CDS//intron       24981863 chr10:102743555-102743556(+) m6A CDS//intron       25456834//24981863 chr10:102743818-102743819(+) m6A CDS//intron       24981863 chr10:102743903-102743904(+) m6A 3'UTR//intron       24981863 chr10:102744072-102744073(+) m6A 3'UTR//5'UTR//exon//intron       24209618 chr10:102744457-102744458(+) m6A 3'UTR//CDS//exon       24981863 chr10:102744565-102744566(+) m6A 3'UTR//CDS//intron       24209618//24981863 chr10:102744653-102744654(+) m6A 3'UTR//intron       24209618//24981863 chr10:102744766-102744767(+) m6A 3'UTR//intron       24981863 chr10:102744792-102744793(+) m6A 3'UTR//intron       24981863 chr10:102744919-102744920(+) m6A 3'UTR//intron       25456834//24981863 chr10:102744983-102744984(+) m6A 3'UTR//intron       25456834//24981863 chr10:102745096-102745097(+) m6A 3'UTR//intron       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SEMA4G	Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	kshv-miR-K12-4-3p	Panobinostat       6918837 Nilotinib       644241 Irinotecan       60838 Topotecan       60700 l-685,458       5479543 Palbociclib       5330286 Dovitinib       135398510 Crizotinib       11626560 Nvp-aew541       11476171 Pha-665752       10461815

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-4-3p
Interactor2: SEMA4G

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg