Detail Information

Basic Information:


  VIRBase ID:  

VHID00464711

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-4-3p:           LATS2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-4-3p LATS2
miRBase
Accession/Entrez ID		 MIMAT0002192 26524
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA mRNA
Alias - KPM

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR LATS2
chr13:21556617(-) A-I      intronic
chr13:21556619(-) A-I      intronic
chr13:21556706(-) A-I      intronic
chr13:21595079(-) A-I      intronic
chr13:21595078(-) A-I      intronic
chr13:21595075(-) A-I      intronic
chr13:21556761(-) A-I      intronic
chr13:21595058(-) A-I      intronic
chr13:21595053(-) A-I      intronic
chr13:21595047(-) A-I      intronic
chr13:21556741(-) A-I      intronic
chr13:21570775(-) A-I      intronic
chr13:21570792(-) A-I      intronic
chr13:21570795(-) A-I      intronic
chr13:21556762(-) A-I      intronic
chr13:21595048(-) A-I      intronic
chr13:21570799(-) A-I      intronic
chr13:21570801(-) A-I      intronic
chr13:21614404(-) A-I      intronic
chr13:21614409(-) A-I      intronic
chr13:21614413(-) A-I      intronic
chr13:21614426(-) A-I      intronic
chr13:21556627(-) A-I      intronic
chr13:21570655(-) A-I      intronic
chr13:21594030(-) A-I      intronic
chr13:21606531(-) A-I      intronic
chr13:21614418(-) A-I      intronic
chr13:21616731(-) A-I      intronic
chr13:21616938(-) A-I      intronic
chr13:21618997(-) A-I      intronic
chr13:21595076(-) A-I      intronic
chr13:21625906(-) A-I      intronic
chr13:21625984(-) A-I      intronic
chr13:21556488(-) A-I      intronic
chr13:21556498(-) A-I      intronic
chr13:21556518(-) A-I      intronic
chr13:21626013(-) A-I      intronic
chr13:21626055(-) A-I      intronic
chr13:21626777(-) A-I      intronic
chr13:21595100(-) A-I      intronic
chr13:21595085(-) A-I      intronic
chr13:21556523(-) A-I      intronic
chr13:21556588(-) A-I      intronic
chr13:21556596(-) A-I      intronic
chr13:21610438(-) A-I      intronic
chr13:21610365(-) A-I      intronic
chr13:21611486(-) A-I      intronic
chr13:21561110(-) A-I      intronic
chr13:21557018(-) A-I      intronic
chr13:21593064(-) A-I      intronic
chr13:21626737(-) A-I      intronic
chr13:21626592(-) A-I      intronic
chr13:21626532(-) A-I      intronic
chr13:21625877(-) A-I      intronic
chr13:21618965(-) A-I      intronic
chr13:21615316(-) A-I      intronic
chr13:21615250(-) A-I      intronic
chr13:21614100(-) A-I      intronic
chr13:21634021(-) A-I      intronic
chr13:21614090(-) A-I      intronic
chr13:21610364(-) A-I      intronic
chr13:21606678(-) A-I      intronic
chr13:21606661(-) A-I      intronic
chr13:21556886(-) A-I      intronic
chr13:21605899(-) A-I      intronic
chr13:21605747(-) A-I      intronic
chr13:21605732(-) A-I      intronic
chr13:21556614(-) A-I      intronic
chr13:21605728(-) A-I      intronic
chr13:21604211(-) A-I      intronic
chr13:21604083(-) A-I      intronic
chr13:21603790(-) A-I      intronic
chr13:21602986(-) A-I      intronic
chr13:21617394(-) A-I      intronic
chr13:21599468(-) A-I      intronic
chr13:21593989(-) A-I      intronic
chr13:21593551(-) A-I      intronic
chr13:21592058(-) A-I      intronic
chr13:21591879(-) A-I      intronic
chr13:21591867(-) A-I      intronic
chr13:21577117(-) A-I      intronic
chr13:21577115(-) A-I      intronic
chr13:21576262(-) A-I      intronic
chr13:21574116(-) A-I      intronic
chr13:21557030(-) A-I      intronic
chr13:21559710(-) A-I      intronic
chr13:21559634(-) A-I      intronic
chr13:21558241(-) A-I      intronic
chr13:21558237(-) A-I      intronic
chr13:21558162(-) A-I      intronic
chr13:21556995(-) A-I      intronic
chr13:21556928(-) A-I      intronic
chr13:21556920(-) A-I      intronic
chr13:21556687(-) A-I      intronic
chr13:21556668(-) A-I      intronic
chr13:21556657(-) A-I      intronic
chr13:21556587(-) A-I      intronic
chr13:21561222(-) A-I      intronic
chr13:21556654(-) A-I      intronic
chr13:21556653(-) A-I      intronic
chr13:21572258(-) A-I      intronic
chr13:21556566(-) A-I      intronic
chr13:21556559(-) A-I      intronic
chr13:21556556(-) A-I      intronic
chr13:21556547(-) A-I      intronic
chr13:21556536(-) A-I      intronic
chr13:21559928(-) A-I      intronic
chr13:21556485(-) A-I      intronic
chr13:21552283(-) A-I      intronic
chr13:21552183(-) A-I      intronic
chr13:21551343(-) A-I      intronic
chr13:21561115(-) A-I      intronic
chr13:21594044(-) A-I      intronic
chr13:21611481(-) A-I      intronic
chr13:21611480(-) A-I      intronic
chr13:21611431(-) A-I      intronic
chr13:21610444(-) A-I      intronic
chr13:21602935(-) A-I      intronic
chr13:21557281(-) A-I      intronic
chr13:21616750(-) A-I      intronic
chr13:21572282(-) A-I      intronic
chr13:21603669(-) A-I      intronic
chr13:21618960(-) A-I      intronic
chr13:21556874(-) A-I      intronic
chr13:21568905(-) A-I      intronic
chr13:21606680(-) A-I      intronic
chr13:21556465(-) A-I      intronic
chr13:21617413(-) A-I      intronic
chr13:21556486(-) A-I      intronic
chr13:21616740(-) A-I      intronic
chr13:21603675(-) A-I      intronic
chr13:21626654(-) A-I      intronic
chr13:21561140(-) A-I      intronic
chr13:21559768(-) A-I      intronic
chr13:21556677(-) A-I      intronic
chr13:21625847(-) A-I      intronic
chr13:21572416(-) A-I      intronic
chr13:21573706(-) A-I      intronic
chr13:21614103(-) A-I      intronic
chr13:21567052(-) A-I      intronic
chr13:21605787(-) A-I      intronic
chr13:21619007(-) A-I      intronic
chr13:21559712(-) A-I      intronic
chr13:21614315(-) A-I      intronic
chr13:21557008(-) A-I      intronic
chr13:21602757(-) A-I      intronic
chr13:21558266(-) A-I      intronic
chr13:21556982(-) A-I      intronic
chr13:21595911(-) A-I      intronic
chr13:21561212(-) A-I      intronic
chr13:21619066(-) A-I      intronic
chr13:21594027(-) A-I      intronic
chr13:21598313(-) A-I      intronic
chr13:21559690(-) A-I      intronic
chr13:21570654(-) A-I      intronic
chr13:21558271(-) A-I      intronic
chr13:21627194(-) A-I      intronic
chr13:21570590(-) A-I      intronic
chr13:21614278(-) A-I      intronic
chr13:21556582(-) A-I      intronic
chr13:21610443(-) A-I      intronic
chr13:21610335(-) A-I      intronic
chr13:21610450(-) A-I      intronic
chr13:21626587(-) A-I      intronic
chr13:21610369(-) A-I      intronic
chr13:21593035(-) A-I      intronic
chr13:21610826(-) A-I      intronic
chr13:21593604(-) A-I      intronic
chr13:21575942(-) A-I      intronic
chr13:21556539(-) A-I      intronic
chr13:21556629(-) A-I      intronic
chr13:21570586(-) A-I      intronic
chr13:21551462(-) A-I      intronic
chr13:21576616(-) A-I      intronic
chr13:21573870(-) A-I      intronic
chr13:21614269(-) A-I      intronic
chr13:21558208(-) A-I      intronic
chr13:21619053(-) A-I      intronic
chr13:21556578(-) A-I      intronic
chr13:21602891(-) A-I      intronic
chr13:21610910(-) A-I      intronic
chr13:21626699(-) A-I      intronic
chr13:21592854(-) A-I      intronic
chr13:21556974(-) A-I      intronic
chr13:21556887(-) A-I      intronic
chr13:21557068(-) A-I      intronic
chr13:21626627(-) A-I      intronic
chr13:21557069(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED LATS2
chr13:21595884(-) A-I intron -    21960545
chr13:21605843(-) A-I intron -    21960545
chr13:21618980(-) A-I intron -    21960545

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase LATS2
chr13:21548534-21548535(-) m6A 3'UTR       24981863//27773535
chr13:21548605-21548606(-) m6A 3'UTR       24981863//27773535
chr13:21548613-21548614(-) m6A 3'UTR       24981863//27773535
chr13:21548621-21548622(-) m6A 3'UTR       24981863//27773535
chr13:21548781-21548782(-) m6A 3'UTR       24284625//25456834//24981863//26404942//27773535//22608085
chr13:21548798-21548799(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr13:21548829-21548830(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr13:21548834-21548835(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr13:21548846-21548847(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr13:21548851-21548852(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr13:21548857-21548858(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr13:21549037-21549038(-) m6A CDS       24284625//24981863//27773535//22608085
chr13:21549207-21549208(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr13:21549282-21549283(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21549408-21549409(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960
chr13:21549438-21549439(-) m6A CDS       24284625//25456834//27773535//27371828//22575960
chr13:21549486-21549487(-) m6A CDS       24284625
chr13:21553840-21553841(-) m6A CDS       24284625
chr13:21555636-21555637(-) m6A CDS       24284625//24209618//25456834//24981863//27773535
chr13:21555643-21555644(-) m6A CDS       24284625//24209618//25456834//24981863//27773535
chr13:21555703-21555704(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960
chr13:21555714-21555715(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960
chr13:21555768-21555769(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960
chr13:21555773-21555774(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960
chr13:21557389-21557390(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr13:21557426-21557427(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr13:21557472-21557473(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21557589-21557590(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21557607-21557608(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21557628-21557629(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21557634-21557635(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21557654-21557655(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21557673-21557674(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21557691-21557692(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21557727-21557728(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21557752-21557753(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21557778-21557779(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21557827-21557828(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21557853-21557854(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21557917-21557918(-) Cm CDS       -
chr13:21557939-21557940(-) m6A CDS       24284625//24209618//24981863//27773535
chr13:21562072-21562073(-) m6A CDS       24284625//24981863//27773535
chr13:21562170-21562171(-) m6A CDS       24284625//25456834//24981863//27773535//27371828
chr13:21562195-21562196(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828
chr13:21562227-21562228(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21562317-21562318(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr13:21562389-21562390(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr13:21562702-21562703(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr13:21562782-21562783(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr13:21562845-21562846(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr13:21562860-21562861(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr13:21563030-21563031(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960
chr13:21563071-21563072(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960
chr13:21563129-21563130(-) m6A CDS       24284625//24981863//27371828//22575960
chr13:21563280-21563281(-) m6A CDS//exon       24284625//27371828//22575960
chr13:21563392-21563393(-) m6A CDS//exon       24284625//27773535//27371828//22575960
chr13:21565419-21565420(-) m6A CDS//exon       24284625//27773535//27371828
chr13:21565457-21565458(-) m6A CDS//exon       24284625//27773535
chr13:21565515-21565516(-) m6A CDS//exon       24284625
chr13:21619847-21619848(-) m6A CDS       24284625//24981863//27773535
chr13:21619866-21619867(-) m6A CDS       24284625//24981863//27773535//27371828//22608085
chr13:21619952-21619953(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr13:21620040-21620041(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21620045-21620046(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21620084-21620085(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr13:21620152-21620153(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr13:21620171-21620172(-) m6A 5'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr13:21620176-21620177(-) m6A 5'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr13:21620211-21620212(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:21620249-21620250(-) m6A 5'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr13:21620292-21620293(-) m6A 5'UTR       24284625//24981863//27773535//22608085
chr13:21620314-21620315(-) m6A 5'UTR       24284625//24981863//27773535//22608085
chr13:21620344-21620345(-) m6A 5'UTR       24284625//24981863
chr13:21634279-21634280(-) m6A intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate LATS2
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug kshv-miR-K12-4-3p
Panobinostat       6918837
Nilotinib       644241
Irinotecan       60838
Topotecan       60700
l-685,458       5479543
Palbociclib       5330286
Dovitinib       135398510
Crizotinib       11626560
Nvp-aew541       11476171
Pha-665752       10461815

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-4-3p
Interactor2: LATS2

Evidence Support:


Prediction-Evidence cRep//miRanda//Targetscan
Support Database RepTar//VmiReg

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