Basic Information:

  VIRBase ID:  

VHID00464064

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-4-3p:  MIMAT0002192          BAG4:  NM_001204878     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-4-3p	BAG4
miRBase Accession/Entrez ID	MIMAT0002192	9530
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BAG-4//SODD

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BAG4	chr8:38048553(+) A-I      intronic chr8:38047485(+) A-I      intronic chr8:38047461(+) A-I      intronic chr8:38046546(+) A-I      intronic chr8:38043324(+) A-I      intronic chr8:38042487(+) A-I      intronic chr8:38042454(+) A-I      intronic chr8:38042453(+) A-I      intronic chr8:38042451(+) A-I      intronic chr8:38042442(+) A-I      intronic chr8:38040845(+) A-I      intronic chr8:38039210(+) A-I      intronic chr8:38039108(+) A-I      intronic chr8:38037996(+) A-I      intronic chr8:38037865(+) A-I      intronic chr8:38037855(+) A-I      intronic chr8:38037786(+) A-I      intronic chr8:38037164(+) A-I      intronic chr8:38037163(+) A-I      intronic chr8:38037902(+) A-I      intronic chr8:38036752(+) A-I      intronic chr8:38035830(+) A-I      intronic chr8:38051229(+) A-I      intronic chr8:38063825(+) A-I      intronic chr8:38063586(+) A-I      intronic chr8:38062815(+) A-I      intronic chr8:38062788(+) A-I      intronic chr8:38062642(+) A-I      intronic chr8:38061237(+) A-I      intronic chr8:38060977(+) A-I      intronic chr8:38060196(+) A-I      intronic chr8:38057617(+) A-I      intronic chr8:38056156(+) A-I      intronic chr8:38056146(+) A-I      intronic chr8:38056136(+) A-I      intronic chr8:38055782(+) A-I      intronic chr8:38055771(+) A-I      intronic chr8:38055347(+) A-I      intronic chr8:38055330(+) A-I      intronic chr8:38055318(+) A-I      intronic chr8:38055249(+) A-I      intronic chr8:38054582(+) A-I      intronic chr8:38054474(+) A-I      intronic chr8:38054433(+) A-I      intronic chr8:38054430(+) A-I      intronic chr8:38054419(+) A-I      intronic chr8:38054370(+) A-I      intronic chr8:38054361(+) A-I      intronic chr8:38052773(+) A-I      intronic chr8:38051993(+) A-I      intronic chr8:38051517(+) A-I      intronic chr8:38051516(+) A-I      intronic chr8:38051225(+) A-I      intronic chr8:38051145(+) A-I      intronic chr8:38049021(+) A-I      intronic chr8:38049013(+) A-I      intronic chr8:38069772(+) A-I      3'UTR chr8:38069773(+) A-I      3'UTR chr8:38069806(+) A-I      3'UTR chr8:38069775(+) A-I      3'UTR chr8:38050900(+) A-I      intronic chr8:38039273(+) A-I      intronic chr8:38049039(+) A-I      intronic chr8:38061939(+) A-I      intronic chr8:38062666(+) A-I      intronic chr8:38038539(+) A-I      intronic chr8:38038853(+) A-I      intronic chr8:38037239(+) A-I      intronic chr8:38055357(+) A-I      intronic chr8:38050843(+) A-I      intronic chr8:38037920(+) A-I      intronic chr8:38043272(+) A-I      intronic chr8:38036842(+) A-I      intronic chr8:38051357(+) A-I      intronic chr8:38052919(+) A-I      intronic chr8:38046554(+) A-I      intronic chr8:38064867(+) A-I      intronic chr8:38052940(+) A-I      intronic chr8:38049022(+) A-I      intronic chr8:38039400(+) A-I      intronic chr8:38037894(+) A-I      intronic chr8:38051213(+) A-I      intronic chr8:38061238(+) A-I      intronic chr8:38054534(+) A-I      intronic chr8:38054475(+) A-I      intronic chr8:38060328(+) A-I      intronic chr8:38056188(+) A-I      intronic chr8:38046429(+) A-I      intronic chr8:38049091(+) A-I      intronic chr8:38059068(+) A-I      intronic chr8:38052877(+) A-I      intronic chr8:38060036(+) A-I      intronic chr8:38058910(+) A-I      intronic chr8:38043127(+) A-I      intronic chr8:38052834(+) A-I      intronic chr8:38038869(+) A-I      intronic chr8:38051184(+) A-I      intronic chr8:38057655(+) A-I      intronic chr8:38045277(+) A-I      intronic chr8:38049095(+) A-I      intronic chr8:38037947(+) A-I      intronic chr8:38036855(+) A-I      intronic chr8:38052882(+) A-I      intronic chr8:38048089(+) A-I      intronic chr8:38052035(+) A-I      intronic chr8:38061965(+) A-I      intronic chr8:38046653(+) A-I      intronic chr8:38047510(+) A-I      intronic chr8:38051107(+) A-I      intronic chr8:38050026(+) A-I      intronic chr8:38037881(+) A-I      intronic chr8:38037898(+) A-I      intronic chr8:38042486(+) A-I      intronic chr8:38039302(+) A-I      intronic chr8:38039350(+) A-I      intronic chr8:38043182(+) A-I      intronic chr8:38054050(+) A-I      intronic chr8:38061232(+) A-I      intronic chr8:38036858(+) A-I      intronic chr8:38041999(+) A-I      intronic chr8:38060043(+) A-I      intronic chr8:38038666(+) A-I      intronic chr8:38046576(+) A-I      intronic chr8:38046405(+) A-I      intronic chr8:38064654(+) A-I      intronic chr8:38061273(+) A-I      intronic chr8:38037950(+) A-I      intronic chr8:38046308(+) A-I      intronic chr8:38046575(+) A-I      intronic chr8:38050826(+) A-I      intronic chr8:38052861(+) A-I      intronic chr8:38035806(+) A-I      intronic chr8:38049101(+) A-I      intronic chr8:38036778(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	BAG4	chr8:38035796(+) T-C intron -    22484847 chr8:38035806(+) A-G intron -    22484847 chr8:38036742(+) A-G intron -    22484847 chr8:38036747(+) A-G intron -    22484847 chr8:38038539(+) A-G intron -    22484847 chr8:38038666(+) A-G intron -    22484847 chr8:38043272(+) A-G intron -    22484847 chr8:38046405(+) A-G intron -    22484847 chr8:38046429(+) A-G intron -    22484847 chr8:38046575(+) A-G intron -    22484847 chr8:38046576(+) A-G intron -    22484847 chr8:38047510(+) A-G intron -    22484847 chr8:38050892(+) A-G intron -    22484847 chr8:38050900(+) A-G intron -    22484847 chr8:38052035(+) A-G intron -    22484847 chr8:38052919(+) A-G intron -    22484847 chr8:38054475(+) A-G intron -    22484847 chr8:38055357(+) A-G intron -    22484847 chr8:38055781(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BAG4	chr8:38034117-38034118(+) m6A 5'UTR//intron       24981863 chr8:38034163-38034164(+) m6A 5'UTR//intron       24981863 chr8:38034197-38034198(+) m6A 5'UTR//intron       24981863 chr8:38066792-38066793(+) m6A CDS//intron       24284625//24981863//22608085 chr8:38066832-38066833(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr8:38066880-38066881(+) m6A 3'UTR//intron       24284625//22608085 chr8:38067565-38067566(+) m6A CDS       24284625//24981863//22608085 chr8:38067612-38067613(+) m6A CDS       24284625//24981863//22608085 chr8:38067619-38067620(+) m6A CDS       24284625//24981863//22608085 chr8:38067818-38067819(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr8:38067849-38067850(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:38067893-38067894(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:38067902-38067903(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:38067918-38067919(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:38067931-38067932(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:38068022-38068023(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:38068057-38068058(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:38068150-38068151(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr8:38068223-38068224(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr8:38068252-38068253(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr8:38068311-38068312(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr8:38068340-38068341(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr8:38068354-38068355(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr8:38068371-38068372(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr8:38068394-38068395(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr8:38068470-38068471(+) m6A 3'UTR       24981863//22608085 chr8:38068486-38068487(+) m6A 3'UTR       24981863//22608085 chr8:38068586-38068587(+) m6A 3'UTR       27773535 chr8:38070589-38070590(+) m6A 3'UTR       27773535 chr8:38070623-38070624(+) m6A 3'UTR       27773535 chr8:38070692-38070693(+) m6A 3'UTR       24981863//27773535 chr8:38070728-38070729(+) m6A 3'UTR       24981863//27773535 chr8:38070813-38070814(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BAG4	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Ribosome HEK-293 cells     22199352

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	kshv-miR-K12-4-3p	Panobinostat       6918837 Nilotinib       644241 Irinotecan       60838 Topotecan       60700 l-685,458       5479543 Palbociclib       5330286 Dovitinib       135398510 Crizotinib       11626560 Nvp-aew541       11476171 Pha-665752       10461815

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-4-3p
Interactor2: BAG4

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg