Basic Information:

  VIRBase ID:  

VHID00461213

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-4-5p:  MIMAT0002191          PIK3CG:  NM_002649     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-4-5p	PIK3CG
miRBase Accession/Entrez ID	MIMAT0002191	5294
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	p110gamma//p120-PI3K//PI3CG//PI3K//PI3Kgamma//PIK3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PIK3CG	chr7:106521177(+) A-I      intronic chr7:106521175(+) A-I      intronic chr7:106522298(+) A-I      intronic chr7:106522108(+) A-I      intronic chr7:106522037(+) A-I      intronic chr7:106521227(+) A-I      intronic chr7:106517396(+) A-I      intronic chr7:106517442(+) A-I      intronic chr7:106517457(+) A-I      intronic chr7:106521250(+) A-I      intronic chr7:106522106(+) A-I      intronic chr7:106521257(+) A-I      intronic chr7:106522215(+) A-I      intronic chr7:106521160(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PIK3CG	chr7:106516354(+) G-T intron -    22484847 chr7:106521250(+) A-G intron -    22484847 chr7:106521257(+) A-G intron -    22484847 chr7:106521326(+) A-G intron -    22484847 chr7:106522106(+) A-G intron -    22484847 chr7:106522215(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PIK3CG	chr7:106508246-106508247(+) m6A CDS//intron       - chr7:106508262-106508263(+) m6A CDS//intron       - chr7:106508281-106508282(+) m6A CDS//intron       - chr7:106508357-106508358(+) m6A CDS//intron       - chr7:106508364-106508365(+) m6A CDS//intron       - chr7:106508806-106508807(+) m6A CDS//intron       - chr7:106508871-106508872(+) m6A CDS//intron       25456834 chr7:106508928-106508929(+) m6A CDS//intron       25456834 chr7:106508940-106508941(+) m6A CDS//intron       25456834 chr7:106509039-106509040(+) m6A CDS//intron       - chr7:106509072-106509073(+) m6A CDS//intron       - chr7:106509132-106509133(+) m6A CDS//intron       - chr7:106509162-106509163(+) m6A CDS//intron       - chr7:106509483-106509484(+) m6A CDS//intron       - chr7:106509508-106509509(+) m6A CDS//intron       - chr7:106509531-106509532(+) m6A CDS//intron       - chr7:106509540-106509541(+) m6A CDS//intron       - chr7:106509567-106509568(+) m6A CDS//intron       - chr7:106509627-106509628(+) m6A CDS//intron       - chr7:106509717-106509718(+) m6A CDS//intron       - chr7:106509802-106509803(+) m6A CDS//intron       - chr7:106509824-106509825(+) m6A CDS//intron       - chr7:106509900-106509901(+) m6A CDS//intron       - chr7:106509946-106509947(+) m6A CDS//intron       - chr7:106545807-106545808(+) m6A CDS       - chr7:106545819-106545820(+) m6A CDS       - chr7:106545853-106545854(+) m6A 3'UTR       - chr7:106545897-106545898(+) m6A 3'UTR       - chr7:106545919-106545920(+) m6A 3'UTR       - chr7:106545967-106545968(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PIK3CG	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-4-5p
Interactor2: PIK3CG

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg