Basic Information:

  VIRBase ID:  

VHID00459887

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-5-3p:  MIMAT0002190          QTRT2:  NM_024638     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-5-3p	QTRT2
miRBase Accession/Entrez ID	MIMAT0002190	79691
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	QTRTD1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	QTRT2	chr3:113780554(+) A-I      intronic chr3:113777600(+) A-I      intronic chr3:113803049(+) A-I      intronic chr3:113780447(+) A-I      intronic chr3:113780580(+) A-I      intronic chr3:113803035(+) A-I      intronic chr3:113780695(+) A-I      intronic chr3:113780542(+) A-I      intronic chr3:113780634(+) A-I      intronic chr3:113780958(+) A-I      intronic chr3:113803419(+) A-I      intronic chr3:113780614(+) A-I      intronic chr3:113782911(+) A-I      intronic chr3:113780660(+) A-I      intronic chr3:113803381(+) A-I      intronic chr3:113781160(+) A-I      intronic chr3:113803283(+) A-I      intronic chr3:113780993(+) A-I      intronic chr3:113803196(+) A-I      intronic chr3:113780443(+) A-I      intronic chr3:113780442(+) A-I      intronic chr3:113802989(+) A-I      intronic chr3:113780525(+) A-I      intronic chr3:113781027(+) A-I      intronic chr3:113780957(+) A-I      intronic chr3:113781155(+) A-I      intronic chr3:113781109(+) A-I      intronic chr3:113780608(+) A-I      intronic chr3:113782790(+) A-I      intronic chr3:113781173(+) A-I      intronic chr3:113781234(+) A-I      intronic chr3:113803209(+) A-I      intronic chr3:113803210(+) A-I      intronic chr3:113780949(+) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	QTRT2	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleolus K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Colon cancer cells     24393600 Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-5-3p
Interactor2: QTRT2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg