Basic Information:

  VIRBase ID:  

VHID00458955

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-5-3p:  MIMAT0002190          ARHGEF15:  NM_025014     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-5-3p	ARHGEF15
miRBase Accession/Entrez ID	MIMAT0002190	22899
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ARGEF15//E5//Ephexin5//Vsm-RhoGEF

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ARHGEF15	chr17:8222830(+) A-I      Syn:Glu->Glu chr17:8220205(+) A-I      intronic chr17:8220201(+) A-I      intronic chr17:8220278(+) A-I      intronic chr17:8220181(+) A-I      intronic chr17:8220536(+) A-I      intronic chr17:8221130(+) A-I      intronic chr17:8220686(+) A-I      intronic chr17:8221339(+) A-I      intronic chr17:8221344(+) A-I      intronic chr17:8220339(+) A-I      intronic chr17:8220375(+) A-I      intronic chr17:8220548(+) A-I      intronic chr17:8221152(+) A-I      intronic chr17:8221175(+) A-I      intronic chr17:8221183(+) A-I      intronic chr17:8220310(+) A-I      intronic chr17:8220240(+) A-I      intronic chr17:8221209(+) A-I      intronic chr17:8221220(+) A-I      intronic chr17:8221302(+) A-I      intronic chr17:8221308(+) A-I      intronic chr17:8221225(+) A-I      intronic chr17:8220165(+) A-I      intronic chr17:8220353(+) A-I      intronic chr17:8220164(+) A-I      intronic chr17:8220518(+) A-I      intronic chr17:8220284(+) A-I      intronic chr17:8220281(+) A-I      intronic chr17:8220154(+) A-I      intronic chr17:8221129(+) A-I      intronic chr17:8220519(+) A-I      intronic chr17:8218012(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ARHGEF15	chr17:8213570-8213571(+) m6A 5'UTR       - chr17:8213584-8213585(+) m6A 5'UTR       - chr17:8213618-8213619(+) m6A 5'UTR//exon       - chr17:8213623-8213624(+) m6A 5'UTR//exon       - chr17:8215491-8215492(+) m6A CDS//exon       - chr17:8215502-8215503(+) m6A CDS//exon       - chr17:8215621-8215622(+) m6A CDS//exon       - chr17:8215631-8215632(+) m6A CDS//exon       - chr17:8215689-8215690(+) m6A CDS//exon       - chr17:8224342-8224343(+) m6A 3'UTR       - chr17:8224368-8224369(+) m6A 3'UTR       - chr17:8224447-8224448(+) m6A 3'UTR       - chr17:8224477-8224478(+) m6A 3'UTR       - chr17:8224529-8224530(+) m6A 3'UTR       25456834 chr17:8224619-8224620(+) m6A 3'UTR       25456834 chr17:8224686-8224687(+) m6A 3'UTR       25456834 chr17:8224733-8224734(+) m6A 3'UTR       - chr17:8224742-8224743(+) m6A 3'UTR       - chr17:8225082-8225083(+) m6A 3'UTR       25456834 chr17:8225214-8225215(+) m6A 3'UTR       25456834 chr17:8225261-8225262(+) m6A 3'UTR       - chr17:8225280-8225281(+) m6A 3'UTR       - chr17:8225323-8225324(+) m6A 3'UTR       - chr17:8225362-8225363(+) m6A 3'UTR       - chr17:8225406-8225407(+) m6A 3'UTR       25456834 chr17:8225425-8225426(+) m6A 3'UTR       25456834 chr17:8225468-8225469(+) m6A 3'UTR       25456834 chr17:8225480-8225481(+) m6A 3'UTR       25456834 chr17:8225583-8225584(+) m6A 3'UTR       25456834 chr17:8225589-8225590(+) m6A 3'UTR       25456834 chr17:8225601-8225602(+) m6A 3'UTR       25456834 chr17:8225674-8225675(+) m6A 3'UTR       25456834//24981863 chr17:8225710-8225711(+) m6A 3'UTR       25456834//24981863 chr17:8225720-8225721(+) m6A 3'UTR       25456834//24981863 chr17:8225769-8225770(+) m6A 3'UTR       25456834 chr17:8225801-8225802(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ARHGEF15	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-5-3p
Interactor2: ARHGEF15

Evidence Support:

Prediction-Evidence	cRep//RNAHybrid
Support Database	RepTar//VmiReg