Basic Information:

  VIRBase ID:  

VHID00457776

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-5-3p:  MIMAT0002190          DCC:  NM_005215     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-5-3p	DCC
miRBase Accession/Entrez ID	MIMAT0002190	1630
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CRC18//CRCR1//HGPPS2//IGDCC1//MRMV1//NTN1R1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DCC	chr18:50112359(+) A-I      intronic chr18:50112338(+) A-I      intronic chr18:50112355(+) A-I      intronic chr18:50112306(+) A-I      intronic chr18:49963091(+) A-I      intronic chr18:49936668(+) A-I      intronic chr18:49963143(+) A-I      intronic chr18:49963163(+) A-I      intronic chr18:49963216(+) A-I      intronic chr18:50004329(+) A-I      intronic chr18:50041766(+) A-I      intronic chr18:50085711(+) A-I      intronic chr18:49963098(+) A-I      intronic chr18:49963099(+) A-I      intronic chr18:50177814(+) A-I      intronic chr18:50177815(+) A-I      intronic chr18:50177827(+) A-I      intronic chr18:50839890(+) A-I      intronic chr18:51033132(+) A-I      intronic chr18:50616949(+) A-I      intronic chr18:50790714(+) A-I      intronic chr18:50041767(+) A-I      intronic chr18:50175489(+) A-I      intronic chr18:50789796(+) A-I      intronic chr18:50447978(+) A-I      intronic chr18:50111099(+) A-I      intronic chr18:50169138(+) A-I      intronic chr18:50839878(+) A-I      intronic chr18:50790736(+) A-I      intronic chr18:50171050(+) A-I      intronic chr18:50136651(+) A-I      intronic chr18:50839713(+) A-I      intronic chr18:50085599(+) A-I      intronic chr18:50291683(+) A-I      intronic chr18:50014123(+) A-I      intronic chr18:50169173(+) A-I      intronic chr18:50447948(+) A-I      intronic chr18:50066676(+) A-I      intronic chr18:50992395(+) A-I      intronic chr18:50599748(+) A-I      intronic chr18:50171005(+) A-I      intronic chr18:49995545(+) A-I      intronic chr18:50118200(+) A-I      intronic chr18:49995711(+) A-I      intronic chr18:50156199(+) A-I      intronic chr18:50447949(+) A-I      intronic chr18:50171082(+) A-I      intronic chr18:50067237(+) A-I      intronic chr18:50838933(+) A-I      intronic chr18:50171051(+) A-I      intronic chr18:50615530(+) A-I      intronic chr18:50067256(+) A-I      intronic chr18:50716436(+) A-I      intronic chr18:50839016(+) A-I      intronic chr18:50991191(+) A-I      intronic chr18:50085666(+) A-I      intronic chr18:50716401(+) A-I      intronic chr18:50616913(+) A-I      intronic chr18:50066551(+) A-I      intronic chr18:50991228(+) A-I      intronic chr18:50716442(+) A-I      intronic chr18:50169239(+) A-I      intronic chr18:50615520(+) A-I      intronic chr18:50036317(+) A-I      intronic chr18:50171004(+) A-I      intronic chr18:50616879(+) A-I      intronic chr18:50066627(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	DCC	chr18:50169239(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DCC	chr18:49866914-49866915(+) m6A 5'UTR       25456834 chr18:49866924-49866925(+) m6A 5'UTR       25456834 chr18:49866964-49866965(+) m6A 5'UTR       25456834 chr18:51056980-51056981(+) m6A CDS       - chr18:51057060-51057061(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DCC	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-5-3p
Interactor2: DCC

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg