Basic Information:

  VIRBase ID:  

VHID00454538

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-6-3p:  MIMAT0002189          EDN1:  NM_001955     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-6-3p	EDN1
miRBase Accession/Entrez ID	MIMAT0002189	1906
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ARCND3//ET1//HDLCQ7//PPET1//QME

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EDN1	chr6:12294191-12294192(+) m6A CDS       26404942 chr6:12294250-12294251(+) m6A CDS       26404942 chr6:12294286-12294287(+) m6A CDS       26404942 chr6:12294323-12294324(+) m6A CDS       24981863//26404942 chr6:12294501-12294502(+) m6A CDS       24981863 chr6:12294516-12294517(+) m6A CDS       24981863 chr6:12294543-12294544(+) m6A CDS       24981863 chr6:12294619-12294620(+) m6A CDS       24981863 chr6:12294628-12294629(+) m6A CDS       24981863 chr6:12296201-12296202(+) m6A CDS       24981863 chr6:12296211-12296212(+) m6A CDS       24981863 chr6:12296423-12296424(+) m6A 3'UTR       24981863//26404942 chr6:12296442-12296443(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535 chr6:12296541-12296542(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960 chr6:12296555-12296556(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960 chr6:12296697-12296698(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr6:12296744-12296745(+) m6A 3'UTR       24284625//24209618//24981863//22575960 chr6:12296757-12296758(+) m6A 3'UTR       24284625//24209618//24981863//22575960 chr6:12296790-12296791(+) m6A 3'UTR       24284625//24209618//24981863//22575960 chr6:12296818-12296819(+) m6A 3'UTR       24284625//24981863//22575960 chr6:12296828-12296829(+) m6A 3'UTR       24284625//24981863//22575960 chr6:12296933-12296934(+) m6A 3'UTR       24284625//24981863//26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EDN1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-6-3p
Interactor2: EDN1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg