Basic Information:

  VIRBase ID:  

VHID00453539

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-6-5p:  MIMAT0002188          ARL14EP:  NM_152316     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-6-5p	ARL14EP
miRBase Accession/Entrez ID	MIMAT0002188	120534
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ARF7EP//C11orf46//dJ299F11.1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ARL14EP	chr11:30349872(+) A-I      intronic chr11:30349889(+) A-I      intronic chr11:30349833(+) A-I      intronic chr11:30349443(+) A-I      intronic chr11:30349863(+) A-I      intronic chr11:30349894(+) A-I      intronic chr11:30349294(+) A-I      intronic chr11:30349885(+) A-I      intronic chr11:30349870(+) A-I      intronic chr11:30349923(+) A-I      intronic chr11:30349810(+) A-I      intronic chr11:30349899(+) A-I      intronic chr11:30349792(+) A-I      intronic chr11:30349766(+) A-I      intronic chr11:30349251(+) A-I      intronic chr11:30349451(+) A-I      intronic chr11:30348781(+) A-I      intronic chr11:30349345(+) A-I      intronic chr11:30349250(+) A-I      intronic chr11:30349339(+) A-I      intronic chr11:30350071(+) A-I      intronic chr11:30349942(+) A-I      intronic chr11:30349796(+) A-I      intronic chr11:30349464(+) A-I      intronic chr11:30349954(+) A-I      intronic chr11:30349791(+) A-I      intronic chr11:30349444(+) A-I      intronic chr11:30351075(+) A-I      intronic chr11:30349927(+) A-I      intronic chr11:30349753(+) A-I      intronic chr11:30349228(+) A-I      intronic chr11:30349835(+) A-I      intronic chr11:30349472(+) A-I      intronic chr11:30349710(+) A-I      intronic chr11:30349860(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ARL14EP	chr11:30344665-30344666(+) m6A 5'UTR       24209618//24981863//22608085 chr11:30344704-30344705(+) m6A 5'UTR//exon       24209618//24981863//22608085 chr11:30352453-30352454(+) m6A 5'UTR//exon       24284625//24209618//24981863//22608085 chr11:30352461-30352462(+) m6A 5'UTR//exon       24284625//24209618//24981863//22608085 chr11:30352552-30352553(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085 chr11:30352582-30352583(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr11:30352630-30352631(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr11:30352652-30352653(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr11:30352815-30352816(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr11:30352892-30352893(+) m6A CDS//exon       24284625//24981863//22608085 chr11:30352908-30352909(+) m6A CDS//exon       24284625//22608085 chr11:30353255-30353256(+) m6A exon//intron       22608085 chr11:30353310-30353311(+) m6A exon//intron       24284625//22608085 chr11:30353336-30353337(+) m6A exon//intron       24284625//22608085 chr11:30354418-30354419(+) m6A CDS//exon       24981863//22608085 chr11:30354466-30354467(+) m6A CDS//exon       24981863//22608085 chr11:30354484-30354485(+) m6A CDS//exon       24284625//24981863//22608085 chr11:30354536-30354537(+) m6A CDS       24284625//24981863//22608085 chr11:30358178-30358179(+) m6A CDS       24284625//24981863//22608085 chr11:30358202-30358203(+) m6A CDS       24284625//24981863//22608085 chr11:30358329-30358330(+) m6A CDS       24981863//22608085 chr11:30358355-30358356(+) m6A 3'UTR       24981863//22608085 chr11:30359029-30359030(+) m6A 3'UTR       24981863 chr11:30359114-30359115(+) m6A 3'UTR       24981863 chr11:30359152-30359153(+) m6A 3'UTR       24981863 chr11:30359192-30359193(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ARL14EP	Chromatin K562 cells     - Exosome Blood     - Nucleus HeLa-S3 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	kshv-miR-K12-6-5p	l-685,458       5479543

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-6-5p
Interactor2: ARL14EP

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg