Basic Information:

  VIRBase ID:  

VHID00453266

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-6-5p:  MIMAT0002188          JPH4:  NM_001146028     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-6-5p	JPH4
miRBase Accession/Entrez ID	MIMAT0002188	84502
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	JP4//JPHL1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	JPH4	chr14:24044033(-) A-I      intronic chr14:24043548(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	JPH4	chr14:24040415-24040416(-) m6A CDS       24209618//25456834//24981863//27371828 chr14:24040485-24040486(-) m6A CDS       24209618//25456834//24981863 chr14:24040562-24040563(-) m6A CDS       24209618//25456834//24981863 chr14:24040589-24040590(-) m6A CDS       24209618//25456834//24981863 chr14:24040614-24040615(-) m6A CDS       24209618//25456834//24981863 chr14:24040650-24040651(-) m6A CDS       24209618//25456834 chr14:24040661-24040662(-) m6A CDS       24209618//25456834 chr14:24041036-24041037(-) m6A CDS       24209618 chr14:24041050-24041051(-) m6A CDS       24209618 chr14:24044962-24044963(-) m6A CDS//exon       - chr14:24045276-24045277(-) m6A CDS//exon       24209618//25456834 chr14:24046298-24046299(-) m6A CDS//exon       24209618//25456834 chr14:24046488-24046489(-) m6A CDS//exon       24209618//25456834//24981863 chr14:24047702-24047703(-) m6A 5'UTR//exon       - chr14:24047782-24047783(-) m6A 5'UTR       - chr14:24047920-24047921(-) m6A 5'UTR       - chr14:24047944-24047945(-) m6A 5'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	JPH4	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	kshv-miR-K12-6-5p	l-685,458       5479543

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-6-5p
Interactor2: JPH4

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg