Basic Information:

  VIRBase ID:  

VHID00451416

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-6-5p:  MIMAT0002188          RNF144A:  NR_146069     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-6-5p	RNF144A
miRBase Accession/Entrez ID	MIMAT0002188	9781
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	hUIP4//RNF144//UBCE7IP4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RNF144A	chr2:7062787(+) A-I      intronic chr2:7110098(+) A-I      intronic chr2:7165651(+) A-I      intronic chr2:7110032(+) A-I      intronic chr2:7115807(+) A-I      intronic chr2:7115699(+) A-I      intronic chr2:7070996(+) A-I      intronic chr2:7183052(+) A-I      3'UTR chr2:7062940(+) A-I      intronic chr2:7110022(+) A-I      intronic chr2:7115846(+) A-I      intronic chr2:7165585(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RNF144A	chr2:7180186-7180187(+) m6A 3'UTR//intron       24981863 chr2:7180215-7180216(+) m6A 3'UTR//intron       24981863 chr2:7180271-7180272(+) m6A 3'UTR//intron       24981863 chr2:7180288-7180289(+) m6A 3'UTR//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RNF144A	Chromatin K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	kshv-miR-K12-6-5p	l-685,458       5479543

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-6-5p
Interactor2: RNF144A

Evidence Support:

Prediction-Evidence	miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg