Basic Information:

  VIRBase ID:  

VHID00449706

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-7-3p:  MIMAT0002187          GDF6:  NM_001001557     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-7-3p	GDF6
miRBase Accession/Entrez ID	MIMAT0002187	392255
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BMP-13//BMP13//CDMP2//KFM//KFS//KFS1//KFSL//SGM1//SYNS4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GDF6	chr8:97156550-97156551(-) m6A 3'UTR       25456834 chr8:97156667-97156668(-) m6A 3'UTR       25456834 chr8:97156760-97156761(-) m6A 3'UTR       25456834//24981863 chr8:97156821-97156822(-) m6A 3'UTR//CDS       25456834//24981863 chr8:97156926-97156927(-) m6A CDS//intron       25456834//24981863 chr8:97156935-97156936(-) m6A CDS//intron       25456834//24981863 chr8:97157073-97157074(-) m6A CDS//intron       24981863 chr8:97157295-97157296(-) m6A CDS//intron       - chr8:97157382-97157383(-) m6A CDS       - chr8:97157405-97157406(-) m6A CDS//intron       - chr8:97157550-97157551(-) m6A CDS       - chr8:97157557-97157558(-) m6A CDS       - chr8:97157688-97157689(-) m6A CDS       - chr8:97172610-97172611(-) m6A CDS       - chr8:97172698-97172699(-) m6A CDS       - chr8:97172722-97172723(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-7-3p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	GDF6	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-7-3p
Interactor2: GDF6

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg