Basic Information:

  VIRBase ID:  

VHID00449656

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.6040

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-7-3p:  MIMAT0002187          NUP43:  NR_104456     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-7-3p	NUP43
miRBase Accession/Entrez ID	MIMAT0002187	348995
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bA350J20.1//p42

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NUP43	chr6:150050330(-) A-I      intronic chr6:150050341(-) A-I      intronic chr6:150051222(-) A-I      intronic chr6:150051238(-) A-I      intronic chr6:150051267(-) A-I      intronic chr6:150051320(-) A-I      intronic chr6:150051322(-) A-I      intronic chr6:150051235(-) A-I      intronic chr6:150050303(-) A-I      intronic chr6:150050320(-) A-I      intronic chr6:150054832(-) A-I      intronic chr6:150068499(-) A-I      intronic chr6:150065312(-) A-I      intronic chr6:150061713(-) A-I      intronic chr6:150060596(-) A-I      intronic chr6:150060587(-) A-I      intronic chr6:150059004(-) A-I      intronic chr6:150052478(-) A-I      intronic chr6:150058997(-) A-I      intronic chr6:150058983(-) A-I      intronic chr6:150058967(-) A-I      intronic chr6:150056476(-) A-I      intronic chr6:150056310(-) A-I      intronic chr6:150056246(-) A-I      intronic chr6:150055908(-) A-I      intronic chr6:150055822(-) A-I      intronic chr6:150055815(-) A-I      intronic chr6:150055810(-) A-I      intronic chr6:150055731(-) A-I      intronic chr6:150055527(-) A-I      intronic chr6:150052491(-) A-I      intronic chr6:150054755(-) A-I      intronic chr6:150055178(-) A-I      intronic chr6:150055138(-) A-I      intronic chr6:150055133(-) A-I      intronic chr6:150055125(-) A-I      intronic chr6:150055109(-) A-I      intronic chr6:150053193(-) A-I      intronic chr6:150055107(-) A-I      intronic chr6:150055063(-) A-I      intronic chr6:150055050(-) A-I      intronic chr6:150050224(-) A-I      intronic chr6:150050285(-) A-I      intronic chr6:150051148(-) A-I      intronic chr6:150054795(-) A-I      intronic chr6:150051251(-) A-I      intronic chr6:150051315(-) A-I      intronic chr6:150051318(-) A-I      intronic chr6:150051339(-) A-I      intronic chr6:150051352(-) A-I      intronic chr6:150051358(-) A-I      intronic chr6:150051862(-) A-I      intronic chr6:150052030(-) A-I      intronic chr6:150052048(-) A-I      intronic chr6:150052169(-) A-I      intronic chr6:150053974(-) A-I      intronic chr6:150053943(-) A-I      intronic chr6:150054770(-) A-I      intronic chr6:150054758(-) A-I      intronic chr6:150052187(-) A-I      intronic chr6:150054666(-) A-I      intronic chr6:150052199(-) A-I      intronic chr6:150054162(-) A-I      intronic chr6:150052504(-) A-I      intronic chr6:150052516(-) A-I      intronic chr6:150050286(-) A-I      intronic chr6:150053752(-) A-I      intronic chr6:150053731(-) A-I      intronic chr6:150053725(-) A-I      intronic chr6:150053465(-) A-I      intronic chr6:150053210(-) A-I      intronic chr6:150053206(-) A-I      intronic chr6:150052533(-) A-I      intronic chr6:150053939(-) A-I      intronic chr6:150053935(-) A-I      intronic chr6:150053929(-) A-I      intronic chr6:150053900(-) A-I      intronic chr6:150052665(-) A-I      intronic chr6:150053896(-) A-I      intronic chr6:150053874(-) A-I      intronic chr6:150053870(-) A-I      intronic chr6:150053834(-) A-I      intronic chr6:150053811(-) A-I      intronic chr6:150052685(-) A-I      intronic chr6:150066476(-) A-I      intronic chr6:150050300(-) A-I      intronic chr6:150052258(-) A-I      intronic chr6:150046732(-) A-I      3'UTR chr6:150045889(-) A-I      3'UTR chr6:150045864(-) A-I      3'UTR chr6:150045809(-) A-I      3'UTR chr6:150045894(-) A-I      3'UTR chr6:150046742(-) A-I      3'UTR chr6:150046663(-) A-I      3'UTR chr6:150047496(-) A-I      3'UTR chr6:150045730(-) A-I      3'UTR chr6:150045903(-) A-I      3'UTR chr6:150045742(-) A-I      3'UTR chr6:150046034(-) A-I      3'UTR chr6:150045735(-) A-I      3'UTR chr6:150045772(-) A-I      3'UTR chr6:150045803(-) A-I      3'UTR chr6:150045904(-) A-I      3'UTR chr6:150046738(-) A-I      3'UTR chr6:150047456(-) A-I      3'UTR chr6:150045757(-) A-I      3'UTR chr6:150045758(-) A-I      3'UTR chr6:150045767(-) A-I      3'UTR chr6:150045777(-) A-I      3'UTR chr6:150047350(-) A-I      3'UTR chr6:150047318(-) A-I      3'UTR chr6:150046692(-) A-I      3'UTR chr6:150045831(-) A-I      3'UTR chr6:150045888(-) A-I      3'UTR chr6:150045938(-) A-I      3'UTR chr6:150046508(-) A-I      3'UTR chr6:150045975(-) A-I      3'UTR chr6:150045893(-) A-I      3'UTR chr6:150047531(-) A-I      3'UTR chr6:150046625(-) A-I      3'UTR chr6:150046606(-) A-I      3'UTR chr6:150046593(-) A-I      3'UTR chr6:150046585(-) A-I      3'UTR chr6:150046568(-) A-I      3'UTR chr6:150046745(-) A-I      3'UTR chr6:150046533(-) A-I      3'UTR chr6:150045792(-) A-I      3'UTR chr6:150046403(-) A-I      3'UTR chr6:150046372(-) A-I      3'UTR chr6:150046668(-) A-I      3'UTR chr6:150045962(-) A-I      3'UTR chr6:150052444(-) A-I      intronic chr6:150051819(-) A-I      intronic chr6:150052590(-) A-I      intronic chr6:150051257(-) A-I      intronic chr6:150055790(-) A-I      intronic chr6:150055206(-) A-I      intronic chr6:150055536(-) A-I      intronic chr6:150054775(-) A-I      intronic chr6:150055834(-) A-I      intronic chr6:150054168(-) A-I      intronic chr6:150051418(-) A-I      intronic chr6:150052186(-) A-I      intronic chr6:150055341(-) A-I      intronic chr6:150054613(-) A-I      intronic chr6:150051261(-) A-I      intronic chr6:150051395(-) A-I      intronic chr6:150050306(-) A-I      intronic chr6:150058994(-) A-I      intronic chr6:150051349(-) A-I      intronic chr6:150052014(-) A-I      intronic chr6:150056993(-) A-I      intronic chr6:150055851(-) A-I      intronic chr6:150052060(-) A-I      intronic chr6:150055462(-) A-I      intronic chr6:150054750(-) A-I      intronic chr6:150052479(-) A-I      intronic chr6:150056323(-) A-I      intronic chr6:150061665(-) A-I      intronic chr6:150055717(-) A-I      intronic chr6:150052451(-) A-I      intronic chr6:150055485(-) A-I      intronic chr6:150056728(-) A-I      intronic chr6:150058237(-) A-I      intronic chr6:150060439(-) A-I      intronic chr6:150056282(-) A-I      intronic chr6:150052577(-) A-I      intronic chr6:150050346(-) A-I      intronic chr6:150063434(-) A-I      intronic chr6:150058877(-) A-I      intronic chr6:150054849(-) A-I      intronic chr6:150054738(-) A-I      intronic chr6:150052146(-) A-I      intronic chr6:150051966(-) A-I      intronic chr6:150060458(-) A-I      intronic chr6:150052349(-) A-I      intronic chr6:150051150(-) A-I      intronic chr6:150054761(-) A-I      intronic chr6:150056428(-) A-I      intronic chr6:150052354(-) A-I      intronic chr6:150062875(-) A-I      intronic chr6:150051807(-) A-I      intronic chr6:150054679(-) A-I      intronic chr6:150054776(-) A-I      intronic chr6:150051213(-) A-I      intronic chr6:150055453(-) A-I      intronic chr6:150055028(-) A-I      intronic chr6:150058612(-) A-I      intronic chr6:150060519(-) A-I      intronic chr6:150052655(-) A-I      intronic chr6:150051274(-) A-I      intronic chr6:150050400(-) A-I      intronic chr6:150054854(-) A-I      intronic chr6:150055099(-) A-I      intronic chr6:150051894(-) A-I      intronic chr6:150054164(-) A-I      intronic chr6:150046603(-) A-I      3'UTR chr6:150045900(-) A-I      3'UTR chr6:150046389(-) A-I      3'UTR chr6:150046412(-) A-I      3'UTR chr6:150045884(-) A-I      3'UTR chr6:150045895(-) A-I      3'UTR chr6:150045949(-) A-I      3'UTR chr6:150045943(-) A-I      3'UTR chr6:150046351(-) A-I      3'UTR chr6:150045907(-) A-I      3'UTR chr6:150045805(-) A-I      3'UTR chr6:150045957(-) A-I      3'UTR chr6:150046435(-) A-I      3'UTR chr6:150046687(-) A-I      3'UTR chr6:150045835(-) A-I      3'UTR chr6:150046484(-) A-I      3'UTR chr6:150047376(-) A-I      3'UTR chr6:150045857(-) A-I      3'UTR chr6:150045828(-) A-I      3'UTR chr6:150046662(-) A-I      3'UTR chr6:150045818(-) A-I      3'UTR chr6:150045734(-) A-I      3'UTR chr6:150046423(-) A-I      3'UTR chr6:150045901(-) A-I      3'UTR chr6:150045918(-) A-I      3'UTR chr6:150046471(-) A-I      3'UTR chr6:150046340(-) A-I      3'UTR chr6:150045749(-) A-I      3'UTR chr6:150045997(-) A-I      3'UTR chr6:150046642(-) A-I      3'UTR chr6:150045928(-) A-I      3'UTR chr6:150045736(-) A-I      3'UTR chr6:150046673(-) A-I      3'UTR chr6:150045755(-) A-I      3'UTR chr6:150045998(-) A-I      3'UTR chr6:150047460(-) A-I      3'UTR chr6:150046681(-) A-I      3'UTR chr6:150046581(-) A-I      3'UTR chr6:150047308(-) A-I      3'UTR chr6:150047423(-) A-I      3'UTR chr6:150046613(-) A-I      3'UTR chr6:150045825(-) A-I      3'UTR chr6:150046688(-) A-I      3'UTR chr6:150046562(-) A-I      3'UTR chr6:150045920(-) A-I      3'UTR chr6:150045951(-) A-I      3'UTR chr6:150045860(-) A-I      3'UTR chr6:150045841(-) A-I      3'UTR chr6:150045747(-) A-I      3'UTR chr6:150046485(-) A-I      3'UTR chr6:150045788(-) A-I      3'UTR chr6:150047420(-) A-I      3'UTR chr6:150046486(-) A-I      3'UTR chr6:150045787(-) A-I      3'UTR chr6:150046649(-) A-I      3'UTR chr6:150047455(-) A-I      3'UTR chr6:150047430(-) A-I      3'UTR chr6:150045817(-) A-I      3'UTR chr6:150046545(-) A-I      3'UTR chr6:150045848(-) A-I      3'UTR chr6:150047300(-) A-I      3'UTR chr6:150046495(-) A-I      3'UTR chr6:150047459(-) A-I      3'UTR chr6:150045868(-) A-I      3'UTR chr6:150045750(-) A-I      3'UTR chr6:150045796(-) A-I      3'UTR chr6:150047384(-) A-I      3'UTR chr6:150047370(-) A-I      3'UTR chr6:150046415(-) A-I      3'UTR chr6:150045965(-) A-I      3'UTR chr6:150046432(-) A-I      3'UTR chr6:150045929(-) A-I      3'UTR chr6:150045926(-) A-I      3'UTR chr6:150045852(-) A-I      3'UTR chr6:150051283(-) A-I      intronic chr6:150060499(-) A-I      intronic chr6:150052642(-) A-I      intronic chr6:150055524(-) A-I      intronic chr6:150050347(-) A-I      intronic chr6:150061252(-) A-I      intronic chr6:150056291(-) A-I      intronic chr6:150051850(-) A-I      intronic chr6:150052647(-) A-I      intronic chr6:150051849(-) A-I      intronic chr6:150053860(-) A-I      intronic chr6:150064217(-) A-I      intronic chr6:150051864(-) A-I      intronic chr6:150052583(-) A-I      intronic chr6:150060695(-) A-I      intronic chr6:150051845(-) A-I      intronic chr6:150053425(-) A-I      intronic chr6:150058824(-) A-I      intronic chr6:150054665(-) A-I      intronic chr6:150053600(-) A-I      intronic chr6:150063301(-) A-I      intronic chr6:150055493(-) A-I      intronic chr6:150051206(-) A-I      intronic chr6:150050302(-) A-I      intronic chr6:150057291(-) A-I      intronic chr6:150051160(-) A-I      intronic chr6:150058859(-) A-I      intronic chr6:150051957(-) A-I      intronic chr6:150051952(-) A-I      intronic chr6:150055890(-) A-I      intronic chr6:150059000(-) A-I      intronic chr6:150053670(-) A-I      intronic chr6:150058338(-) A-I      intronic chr6:150061573(-) A-I      intronic chr6:150058825(-) A-I      intronic chr6:150053899(-) A-I      intronic chr6:150052461(-) A-I      intronic chr6:150055541(-) A-I      intronic chr6:150054706(-) A-I      intronic chr6:150051396(-) A-I      intronic chr6:150060696(-) A-I      intronic chr6:150053218(-) A-I      intronic chr6:150054873(-) A-I      intronic chr6:150051218(-) A-I      intronic chr6:150054627(-) A-I      intronic chr6:150051231(-) A-I      intronic chr6:150060293(-) A-I      intronic chr6:150062447(-) A-I      intronic chr6:150054759(-) A-I      intronic chr6:150054868(-) A-I      intronic chr6:150054710(-) A-I      intronic chr6:150058996(-) A-I      intronic chr6:150053918(-) A-I      intronic chr6:150053091(-) A-I      intronic chr6:150053152(-) A-I      intronic chr6:150056679(-) A-I      intronic chr6:150052587(-) A-I      intronic chr6:150054760(-) A-I      intronic chr6:150053737(-) A-I      intronic chr6:150068650(-) A-I      intronic chr6:150054846(-) A-I      intronic chr6:150056287(-) A-I      intronic chr6:150051846(-) A-I      intronic chr6:150056703(-) A-I      intronic chr6:150050321(-) A-I      intronic chr6:150051342(-) A-I      intronic chr6:150053235(-) A-I      intronic chr6:150051338(-) A-I      intronic chr6:150051173(-) A-I      intronic chr6:150058951(-) A-I      intronic chr6:150055519(-) A-I      intronic chr6:150050195(-) A-I      intronic chr6:150055359(-) A-I      intronic chr6:150055389(-) A-I      intronic chr6:150057049(-) A-I      intronic chr6:150061593(-) A-I      intronic chr6:150052265(-) A-I      intronic chr6:150053150(-) A-I      intronic chr6:150058406(-) A-I      intronic chr6:150054693(-) A-I      intronic chr6:150051270(-) A-I      intronic chr6:150052212(-) A-I      intronic chr6:150062807(-) A-I      intronic chr6:150051284(-) A-I      intronic chr6:150054827(-) A-I      intronic chr6:150050194(-) A-I      intronic chr6:150052022(-) A-I      intronic chr6:150062569(-) A-I      intronic chr6:150053728(-) A-I      intronic chr6:150055233(-) A-I      intronic chr6:150053824(-) A-I      intronic chr6:150054726(-) A-I      intronic chr6:150053583(-) A-I      intronic chr6:150054800(-) A-I      intronic chr6:150053422(-) A-I      intronic chr6:150054746(-) A-I      intronic chr6:150053155(-) A-I      intronic chr6:150054680(-) A-I      intronic chr6:150054087(-) A-I      intronic chr6:150055232(-) A-I      intronic chr6:150054798(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NUP43	chr6:150045621(-) A-I exon 3'UTR    15342557 chr6:150045748(-) A-I exon 3'UTR    15258596   //16100382   //22028664   //21960545 chr6:150045749(-) A-I exon 3'UTR    15258596   //16100382 chr6:150045750(-) A-I exon 3'UTR    15258596   //22028664   //22327324 chr6:150045755(-) A-I exon 3'UTR    15258596   //22028664   //21960545 chr6:150045756(-) A-I exon 3'UTR    15258596   //22028664 chr6:150045787(-) A-I exon 3'UTR    15342557   //15258596   //22028664   //21960545 chr6:150045788(-) A-I exon 3'UTR    15258596   //22028664   //21960545   //22327324 chr6:150045816(-) A-I exon 3'UTR    15342557   //22028664 chr6:150045818(-) A-I exon 3'UTR    15342557   //15258596   //22028664 chr6:150045825(-) A-I exon 3'UTR    15342557 chr6:150045848(-) A-I exon 3'UTR    15342557   //22028664   //22327324 chr6:150045858(-) A-I exon 3'UTR    15342557   //22028664 chr6:150045860(-) A-I exon 3'UTR    15342557   //22028664 chr6:150045868(-) A-I exon 3'UTR    15342557   //15258596   //22028664 chr6:150045883(-) A-I exon 3'UTR    15342557   //15258596   //22028664 chr6:150045928(-) A-I exon 3'UTR    15342557   //15258596   //22028664   //21960545 chr6:150045997(-) A-I exon 3'UTR    15258596   //22028664 chr6:150045998(-) A-I exon 3'UTR    15258596   //22028664   //21960545   //22327324 chr6:150046020(-) A-I exon 3'UTR    15258596   //22028664 chr6:150046035(-) A-I exon 3'UTR    15258596   //22028664 chr6:150046432(-) A-I exon 3'UTR    15342557   //21960545   //22327324 chr6:150046511(-) A-I exon 3'UTR    15342557   //15258596 chr6:150046545(-) A-I exon 3'UTR    15342557   //15258596   //22327324 chr6:150046559(-) A-I exon 3'UTR    15342557   //15258596   //22327324 chr6:150046603(-) A-I exon 3'UTR    15342557   //15258596   //22327324 chr6:150046613(-) A-I exon 3'UTR    15342557   //15258596   //21960545 chr6:150046638(-) A-I exon 3'UTR    15258596   //22327324 chr6:150046639(-) A-I exon 3'UTR    15258596 chr6:150046642(-) A-I exon 3'UTR    15342557   //15258596 chr6:150046643(-) A-I exon 3'UTR    15342557   //15258596 chr6:150046649(-) A-I exon 3'UTR    15258596 chr6:150046673(-) A-I exon 3'UTR    15258596   //21960545   //22327324 chr6:150046686(-) A-I exon 3'UTR    15258596   //21960545   //22327324 chr6:150046736(-) A-I exon 3'UTR    15342557   //21960545   //22327324 chr6:150047308(-) A-I exon 3'UTR    15342557 chr6:150047359(-) A-I exon 3'UTR    15342557 chr6:150047362(-) A-I exon 3'UTR    15342557   //15258596 chr6:150047368(-) A-I exon 3'UTR    15342557 chr6:150047370(-) A-I exon 3'UTR    15342557   //15258596 chr6:150047376(-) A-I exon 3'UTR    15342557   //15258596 chr6:150047418(-) A-I exon 3'UTR    15342557   //15258596 chr6:150047420(-) A-I exon 3'UTR    15258596 chr6:150047430(-) A-I exon 3'UTR    15342557   //15258596 chr6:150047455(-) A-I exon 3'UTR    15342557 chr6:150047460(-) A-I exon 3'UTR    15342557   //15258596 chr6:150047466(-) A-I exon 3'UTR    15342557 chr6:150047479(-) A-I exon 3'UTR    15342557 chr6:150047495(-) A-I exon 3'UTR    15342557 chr6:150048048(-) A-I exon 3'UTR    15342557 chr6:150045919(-) A-I exon 3'UTR    22028664   //22327324 chr6:150045920(-) A-I exon 3'UTR    22028664   //22327324 chr6:150045926(-) A-I exon 3'UTR    22327324 chr6:150045929(-) A-I exon 3'UTR    22028664   //22327324 chr6:150045951(-) A-I exon 3'UTR    22028664   //21960545   //22327324 chr6:150046340(-) A-I exon 3'UTR    22327324 chr6:150046349(-) A-I exon 3'UTR    21960545   //22327324 chr6:150046350(-) A-I exon 3'UTR    22327324 chr6:150046415(-) A-I exon 3'UTR    22327324 chr6:150046484(-) A-I exon 3'UTR    22327324 chr6:150046485(-) A-I exon 3'UTR    22327324 chr6:150046495(-) A-I exon 3'UTR    22327324 chr6:150046562(-) A-I exon 3'UTR    22327324 chr6:150051206(-) A-I intron -    22327324 chr6:150051231(-) A-I intron -    22327324 chr6:150051270(-) A-I intron -    22327324 chr6:150051849(-) A-I intron -    22327324 chr6:150045747(-) A-I exon 3'UTR    22028664 chr6:150045796(-) A-I exon 3'UTR    22028664 chr6:150045805(-) A-I exon 3'UTR    22028664 chr6:150045817(-) A-I exon 3'UTR    22028664 chr6:150045828(-) A-I exon 3'UTR    22028664 chr6:150045835(-) A-I exon 3'UTR    22028664 chr6:150045852(-) A-I exon 3'UTR    22028664 chr6:150045857(-) A-I exon 3'UTR    22028664 chr6:150045884(-) A-I exon 3'UTR    22028664 chr6:150045887(-) A-I exon 3'UTR    22028664 chr6:150045895(-) A-I exon 3'UTR    22028664 chr6:150045900(-) A-I exon 3'UTR    22028664 chr6:150045901(-) A-I exon 3'UTR    22028664 chr6:150045907(-) A-I exon 3'UTR    22028664 chr6:150045918(-) A-I exon 3'UTR    22028664 chr6:150045949(-) A-I exon 3'UTR    22028664 chr6:150046678(-) A-I exon 3'UTR    21960545 chr6:150046601(-) A-I exon 3'UTR    21960545 chr6:150046349(-) A-G exon 3'UTR    21725310   //22484847 chr6:150045747(-) A-G exon 3'UTR    22484847 chr6:150045748(-) A-G exon 3'UTR    22484847 chr6:150045749(-) A-G exon 3'UTR    22484847 chr6:150045750(-) A-G exon 3'UTR    22484847 chr6:150045755(-) A-G exon 3'UTR    22484847 chr6:150045756(-) A-G exon 3'UTR    22484847 chr6:150045787(-) A-G exon 3'UTR    22484847 chr6:150045788(-) A-G exon 3'UTR    22484847 chr6:150045817(-) A-G exon 3'UTR    22484847 chr6:150045818(-) A-G exon 3'UTR    22484847 chr6:150045841(-) A-G exon 3'UTR    22484847 chr6:150045848(-) A-G exon 3'UTR    22484847 chr6:150045852(-) A-G exon 3'UTR    22484847 chr6:150045857(-) A-G exon 3'UTR    22484847 chr6:150045858(-) A-G exon 3'UTR    22484847 chr6:150045860(-) A-G exon 3'UTR    22484847 chr6:150045868(-) A-G exon 3'UTR    22484847 chr6:150045883(-) A-G exon 3'UTR    22484847 chr6:150045884(-) A-G exon 3'UTR    22484847 chr6:150045887(-) A-G exon 3'UTR    22484847 chr6:150045918(-) A-G exon 3'UTR    22484847 chr6:150045919(-) A-G exon 3'UTR    22484847 chr6:150045920(-) A-G exon 3'UTR    22484847 chr6:150045926(-) A-G exon 3'UTR    22484847 chr6:150045928(-) A-G exon 3'UTR    22484847 chr6:150045929(-) A-G exon 3'UTR    22484847 chr6:150045943(-) A-G exon 3'UTR    22484847 chr6:150045951(-) A-G exon 3'UTR    22484847 chr6:150045952(-) A-G exon 3'UTR    22484847 chr6:150045957(-) A-G exon 3'UTR    22484847 chr6:150045989(-) A-G exon 3'UTR    22484847 chr6:150045997(-) A-G exon 3'UTR    22484847 chr6:150045998(-) A-G exon 3'UTR    22484847 chr6:150046006(-) A-G exon 3'UTR    22484847 chr6:150046020(-) A-G exon 3'UTR    22484847 chr6:150046340(-) A-G exon 3'UTR    22484847 chr6:150046389(-) A-G exon 3'UTR    22484847 chr6:150046415(-) A-G exon 3'UTR    22484847 chr6:150046423(-) A-G exon 3'UTR    22484847 chr6:150046432(-) A-G exon 3'UTR    22484847 chr6:150046435(-) A-G exon 3'UTR    22484847 chr6:150046471(-) A-G exon 3'UTR    22484847 chr6:150046484(-) A-G exon 3'UTR    22484847 chr6:150046485(-) A-G exon 3'UTR    22484847 chr6:150046486(-) A-G exon 3'UTR    22484847 chr6:150046495(-) A-G exon 3'UTR    22484847 chr6:150046545(-) A-G exon 3'UTR    22484847 chr6:150046559(-) A-G exon 3'UTR    22484847 chr6:150046562(-) A-G exon 3'UTR    22484847 chr6:150046581(-) A-G exon 3'UTR    22484847 chr6:150046601(-) A-G exon 3'UTR    22484847 chr6:150046603(-) A-G exon 3'UTR    22484847 chr6:150046613(-) A-G exon 3'UTR    22484847 chr6:150046638(-) A-G exon 3'UTR    22484847 chr6:150046639(-) A-G exon 3'UTR    22484847 chr6:150046642(-) A-G exon 3'UTR    22484847 chr6:150046643(-) A-G exon 3'UTR    22484847 chr6:150046673(-) A-G exon 3'UTR    22484847 chr6:150046678(-) A-G exon 3'UTR    22484847 chr6:150046681(-) A-G exon 3'UTR    22484847 chr6:150046686(-) A-G exon 3'UTR    22484847 chr6:150046687(-) A-G exon 3'UTR    22484847 chr6:150047287(-) A-G exon 3'UTR    22484847 chr6:150047300(-) A-G exon 3'UTR    22484847 chr6:150047362(-) A-G exon 3'UTR    22484847 chr6:150047370(-) A-G exon 3'UTR    22484847 chr6:150047376(-) A-G exon 3'UTR    22484847 chr6:150047379(-) A-G exon 3'UTR    22484847 chr6:150047384(-) A-G exon 3'UTR    22484847 chr6:150047459(-) A-G exon 3'UTR    22484847 chr6:150047460(-) A-G exon 3'UTR    22484847 chr6:150047495(-) A-G exon 3'UTR    22484847 chr6:150050145(-) C-A intron -    22484847 chr6:150050156(-) A-G intron -    22484847 chr6:150050157(-) A-G intron -    22484847 chr6:150050195(-) A-G intron -    22484847 chr6:150050230(-) T-C intron -    22484847 chr6:150050259(-) A-G intron -    22484847 chr6:150050302(-) A-G intron -    22484847 chr6:150050321(-) A-G intron -    22484847 chr6:150050347(-) A-G intron -    22484847 chr6:150050400(-) A-G intron -    22484847 chr6:150050401(-) A-G intron -    22484847 chr6:150051159(-) A-G intron -    22484847 chr6:150051206(-) A-G intron -    22484847 chr6:150051213(-) A-G intron -    22484847 chr6:150051218(-) A-G intron -    22484847 chr6:150051231(-) A-G intron -    22484847 chr6:150051270(-) A-G intron -    22484847 chr6:150051278(-) A-G intron -    22484847 chr6:150051310(-) A-G intron -    22484847 chr6:150051338(-) A-G intron -    22484847 chr6:150051348(-) A-G intron -    22484847 chr6:150051349(-) A-G intron -    22484847 chr6:150051377(-) A-G intron -    22484847 chr6:150051382(-) A-G intron -    22484847 chr6:150051396(-) A-G intron -    22484847 chr6:150051409(-) A-G intron -    22484847 chr6:150051412(-) A-G intron -    22484847 chr6:150051417(-) A-G intron -    22484847 chr6:150051418(-) A-G intron -    22484847 chr6:150051807(-) A-G intron -    22484847 chr6:150051846(-) A-G intron -    22484847 chr6:150051849(-) A-G intron -    22484847 chr6:150051864(-) A-G intron -    22484847 chr6:150051894(-) A-G intron -    22484847 chr6:150051901(-) A-G intron -    22484847 chr6:150051952(-) A-G intron -    22484847 chr6:150051957(-) A-G intron -    22484847 chr6:150051966(-) A-G intron -    22484847 chr6:150052022(-) A-G intron -    22484847 chr6:150052060(-) A-G intron -    22484847 chr6:150052068(-) A-G intron -    22484847 chr6:150052077(-) G-T intron -    22484847 chr6:150052088(-) G-T intron -    22484847 chr6:150052089(-) T-G intron -    22484847 chr6:150052201(-) A-G intron -    22484847 chr6:150052257(-) A-G intron -    22484847 chr6:150052284(-) A-G intron -    22484847 chr6:150052354(-) A-G intron -    22484847 chr6:150052439(-) A-G intron -    22484847 chr6:150052444(-) A-G intron -    22484847 chr6:150052461(-) A-G intron -    22484847 chr6:150052479(-) A-G intron -    22484847 chr6:150052513(-) A-G intron -    22484847 chr6:150052577(-) A-G intron -    22484847 chr6:150052583(-) A-G intron -    22484847 chr6:150052616(-) A-G intron -    22484847 chr6:150052642(-) A-G intron -    22484847 chr6:150052647(-) A-G intron -    22484847 chr6:150052655(-) A-G intron -    22484847 chr6:150053155(-) A-G intron -    22484847 chr6:150053218(-) A-G intron -    22484847 chr6:150053304(-) A-G intron -    22484847 chr6:150053600(-) A-G intron -    22484847 chr6:150053687(-) C-T intron -    22484847 chr6:150053728(-) A-G intron -    22484847 chr6:150053818(-) G-A intron -    22484847 chr6:150053860(-) A-G intron -    22484847 chr6:150053887(-) A-G intron -    22484847 chr6:150054679(-) A-G intron -    22484847 chr6:150054680(-) A-G intron -    22484847 chr6:150054706(-) A-G intron -    22484847 chr6:150054726(-) A-G intron -    22484847 chr6:150054759(-) A-G intron -    22484847 chr6:150054760(-) A-G intron -    22484847 chr6:150054761(-) A-G intron -    22484847 chr6:150054868(-) A-G intron -    22484847 chr6:150054988(-) A-G intron -    22484847 chr6:150055021(-) A-G intron -    22484847 chr6:150055028(-) A-G intron -    22484847 chr6:150055098(-) A-G intron -    22484847 chr6:150055099(-) A-G intron -    22484847 chr6:150055142(-) A-G intron -    22484847 chr6:150055161(-) A-G intron -    22484847 chr6:150055206(-) A-G intron -    22484847 chr6:150055232(-) A-G intron -    22484847 chr6:150055233(-) A-G intron -    22484847 chr6:150055388(-) A-G intron -    22484847 chr6:150055462(-) A-G intron -    22484847 chr6:150055536(-) A-G intron -    22484847 chr6:150055717(-) A-G intron -    22484847 chr6:150055790(-) A-G intron -    22484847 chr6:150055834(-) A-G intron -    22484847 chr6:150055851(-) A-G intron -    22484847 chr6:150056323(-) A-G intron -    22484847 chr6:150056428(-) A-G intron -    22484847 chr6:150057289(-) A-G intron -    22484847 chr6:150057291(-) A-G intron -    22484847 chr6:150058551(-) A-G intron -    22484847 chr6:150058564(-) A-G intron -    22484847 chr6:150058612(-) A-G intron -    22484847 chr6:150058998(-) A-G intron -    22484847 chr6:150060293(-) A-G intron -    22484847 chr6:150061411(-) G-T intron -    22484847 chr6:150062447(-) A-G intron -    22484847 chr6:150046736(-) A-G exon 3'UTR    22484847 chr6:150046741(-) A-G exon 3'UTR    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NUP43	chr6:150045456-150045457(-) m6A 3'UTR       27773535 chr6:150045618-150045619(-) m6A 3'UTR       27773535 chr6:150045675-150045676(-) m6A 3'UTR       27773535 chr6:150046032-150046033(-) m6A 3'UTR       27773535 chr6:150046167-150046168(-) m6A 3'UTR       27773535 chr6:150046235-150046236(-) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-7-3p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	NUP43	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-7-3p
Interactor2: NUP43

Evidence Support:

Weak-Evidence	PAR-CLIP
Prediction-Evidence	cRep//miRanda//PARalyzer//Targetscan
Support Database	RepTar//ViRBase//VIRmiRNA//VmiReg

References:

PMID	22100165	Target region	3'UTR
Source	RepTar//ViRBase//VIRmiRNA//VmiReg	Interactor1 expression	None
Tissue or cell line	BC-1 cells//BC-3 cells//BJAB cells	Interactor2 expression	None
Description	Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites.Clusters with seed matches to expressed miRNAs were considered candidate target sites. Of the clusters mapping to human 3'UTRs, 69% (BC-1) and 70% (BC-3) had seed matches to expressed miRNAs (Tables S6).Table S6A BC-1 derived 3'UTR clusters with seed matches to expressed miRNAs.