Basic Information:

  VIRBase ID:  

VHID00448929

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-7-3p:  MIMAT0002187          RIC3:  NR_144485     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-7-3p	RIC3
miRBase Accession/Entrez ID	MIMAT0002187	79608
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AYST720//PRO1385

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RIC3	chr11:8153203(-) A-I      intronic chr11:8158749(-) A-I      intronic chr11:8158753(-) A-I      intronic chr11:8134001(-) A-I      intronic chr11:8169413(-) A-I      intronic chr11:8135940(-) A-I      intronic chr11:8150399(-) A-I      intronic chr11:8187568(-) A-I      intronic chr11:8181419(-) A-I      intronic chr11:8133938(-) A-I      intronic chr11:8134041(-) A-I      intronic chr11:8169412(-) A-I      intronic chr11:8135894(-) A-I      intronic chr11:8153231(-) A-I      intronic chr11:8134021(-) A-I      intronic chr11:8158982(-) A-I      NonSyn:Lys->Arg chr11:8139658(-) A-I      intronic chr11:8184439(-) A-I      intronic chr11:8153285(-) A-I      intronic chr11:8150479(-) A-I      intronic chr11:8150466(-) A-I      intronic chr11:8181464(-) A-I      intronic chr11:8150485(-) A-I      intronic chr11:8150478(-) A-I      intronic chr11:8187404(-) A-I      intronic chr11:8153282(-) A-I      intronic chr11:8138707(-) A-I      intronic chr11:8153396(-) A-I      intronic chr11:8140164(-) A-I      intronic chr11:8153372(-) A-I      intronic chr11:8133952(-) A-I      intronic chr11:8184468(-) A-I      intronic chr11:8134092(-) A-I      intronic chr11:8150369(-) A-I      intronic chr11:8135891(-) A-I      intronic chr11:8138774(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	RIC3	chr11:8158982(-) A-I exon CDS    19478186

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RIC3	chr11:8131528-8131529(-) m6A 3'UTR       - chr11:8131590-8131591(-) m6A 3'UTR       - chr11:8132241-8132242(-) m6A 3'UTR//exon       25456834//24981863 chr11:8132332-8132333(-) m6A 3'UTR//CDS//exon       25456834//24981863 chr11:8132357-8132358(-) m6A 3'UTR//CDS//exon       25456834//24981863 chr11:8132450-8132451(-) m6A 3'UTR//CDS//exon       25456834 chr11:8132589-8132590(-) m6A 3'UTR//CDS//exon       25456834//24981863 chr11:8132621-8132622(-) m6A 3'UTR//CDS//exon       25456834//24981863 chr11:8132644-8132645(-) m6A 3'UTR//CDS//exon       24981863 chr11:8132669-8132670(-) m6A 3'UTR//CDS//exon       24981863 chr11:8148213-8148214(-) m6A 3'UTR//CDS//exon//intron       24981863 chr11:8157346-8157347(-) m6A exon//intron       24981863 chr11:8157365-8157366(-) m6A exon//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-7-3p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	RIC3	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-7-3p
Interactor2: RIC3

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg