Detail Information

Basic Information:


  VIRBase ID:  

VHID00448825

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-7-3p:           BACH2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-7-3p BACH2
miRBase
Accession/Entrez ID		 MIMAT0002187 60468
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA mRNA
Alias - BTBD25//IMD60

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR BACH2
chr6:90899800(-) A-I      intronic
chr6:90826758(-) A-I      intronic
chr6:90899773(-) A-I      intronic
chr6:90826705(-) A-I      intronic
chr6:90826698(-) A-I      intronic
chr6:90826701(-) A-I      intronic
chr6:90899801(-) A-I      intronic
chr6:90899791(-) A-I      intronic
chr6:90899774(-) A-I      intronic
chr6:90952844(-) A-I      intronic
chr6:90952832(-) A-I      intronic
chr6:90952737(-) A-I      intronic
chr6:90952736(-) A-I      intronic
chr6:90952695(-) A-I      intronic
chr6:90934834(-) A-I      intronic
chr6:90899897(-) A-I      intronic
chr6:90899882(-) A-I      intronic
chr6:90899763(-) A-I      intronic
chr6:90899748(-) A-I      intronic
chr6:90899725(-) A-I      intronic
chr6:90647400(-) A-I      intronic
chr6:90647413(-) A-I      intronic
chr6:90678648(-) A-I      intronic
chr6:90717113(-) A-I      intronic
chr6:90721473(-) A-I      intronic
chr6:90899289(-) A-I      intronic
chr6:90721733(-) A-I      intronic
chr6:90722517(-) A-I      intronic
chr6:90722555(-) A-I      intronic
chr6:90722556(-) A-I      intronic
chr6:90722563(-) A-I      intronic
chr6:90722589(-) A-I      intronic
chr6:90722610(-) A-I      intronic
chr6:90722612(-) A-I      intronic
chr6:90722645(-) A-I      intronic
chr6:90722646(-) A-I      intronic
chr6:90722652(-) A-I      intronic
chr6:90723622(-) A-I      intronic
chr6:90723730(-) A-I      intronic
chr6:90723754(-) A-I      intronic
chr6:90748584(-) A-I      intronic
chr6:90748634(-) A-I      intronic
chr6:90748707(-) A-I      intronic
chr6:90899883(-) A-I      intronic
chr6:90959391(-) A-I      intronic
chr6:90957167(-) A-I      intronic
chr6:90957087(-) A-I      intronic
chr6:90957066(-) A-I      intronic
chr6:90954866(-) A-I      intronic
chr6:90952894(-) A-I      intronic
chr6:90952845(-) A-I      intronic
chr6:90899240(-) A-I      intronic
chr6:90722445(-) A-I      intronic
chr6:90959382(-) A-I      intronic
chr6:90957083(-) A-I      intronic
chr6:90723506(-) A-I      intronic
chr6:90899822(-) A-I      intronic
chr6:90749225(-) A-I      intronic
chr6:90678644(-) A-I      intronic
chr6:90724351(-) A-I      intronic
chr6:90716564(-) A-I      intronic
chr6:90678910(-) A-I      intronic
chr6:90877353(-) A-I      intronic
chr6:90643500(-) A-I      intronic
chr6:90723502(-) A-I      intronic
chr6:90877987(-) A-I      intronic
chr6:90719486(-) A-I      intronic
chr6:90722564(-) A-I      intronic
chr6:90899827(-) A-I      intronic
chr6:90959453(-) A-I      intronic
chr6:90715949(-) A-I      intronic
chr6:90959379(-) A-I      intronic
chr6:90722183(-) A-I      intronic
chr6:90959245(-) A-I      intronic
chr6:90749255(-) A-I      intronic
chr6:90899690(-) A-I      intronic
chr6:90722114(-) A-I      intronic
chr6:90646085(-) A-I      intronic
chr6:90724377(-) A-I      intronic
chr6:90678911(-) A-I      intronic
chr6:90749287(-) A-I      intronic
chr6:90722301(-) A-I      intronic
chr6:90959463(-) A-I      intronic
chr6:90748592(-) A-I      intronic
chr6:90722211(-) A-I      intronic
chr6:90678901(-) A-I      intronic
chr6:90877351(-) A-I      intronic
chr6:90646140(-) A-I      intronic
chr6:90957227(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED BACH2
chr6:90722296(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase BACH2
chr6:90636692-90636693(-) m6A 3'UTR       27773535
chr6:90636701-90636702(-) m6A 3'UTR       27773535
chr6:90636762-90636763(-) m6A 3'UTR       27773535
chr6:90636783-90636784(-) m6A 3'UTR       27773535
chr6:90637117-90637118(-) m6A 3'UTR       24981863//22608085
chr6:90637123-90637124(-) m6A 3'UTR       24981863//22608085
chr6:90637190-90637191(-) m6A 3'UTR       22608085
chr6:90637208-90637209(-) m6A 3'UTR       22608085
chr6:90637245-90637246(-) m6A 3'UTR       22608085
chr6:90637292-90637293(-) m6A 3'UTR       22608085
chr6:90637783-90637784(-) m6A 3'UTR       27773535
chr6:90637790-90637791(-) m6A 3'UTR       27773535
chr6:90637870-90637871(-) m6A 3'UTR       24209618//27773535//22608085
chr6:90637878-90637879(-) m6A 3'UTR       24209618//27773535//22608085
chr6:90637966-90637967(-) m6A 3'UTR       27773535//22608085
chr6:90637995-90637996(-) m6A 3'UTR       27773535//22608085
chr6:90638126-90638127(-) m6A 3'UTR       27773535//22608085
chr6:90638135-90638136(-) m6A 3'UTR       27773535//22608085
chr6:90638170-90638171(-) m6A 3'UTR       24981863//27773535//22608085
chr6:90638229-90638230(-) m6A 3'UTR       24981863//27773535//27371828//22608085
chr6:90638287-90638288(-) m6A 3'UTR       25456834//24981863//27773535//27371828//22608085
chr6:90638299-90638300(-) m6A 3'UTR       25456834//24981863//27773535//27371828//22608085
chr6:90638311-90638312(-) m6A 3'UTR       25456834//24981863//27773535//22608085
chr6:90638367-90638368(-) m6A 3'UTR       24209618//25456834//24981863//27773535//22608085
chr6:90638497-90638498(-) m6A 3'UTR       24209618//27773535//22608085
chr6:90638584-90638585(-) m6A 3'UTR       27773535//22608085
chr6:90638601-90638602(-) m6A 3'UTR       27773535//22608085
chr6:90638613-90638614(-) m6A 3'UTR       27773535
chr6:90638618-90638619(-) m6A 3'UTR       27773535
chr6:90638642-90638643(-) m6A 3'UTR       27773535
chr6:90638710-90638711(-) m6A 3'UTR       27773535
chr6:90639367-90639368(-) m6A 3'UTR       27773535
chr6:90639430-90639431(-) m6A 3'UTR       27773535
chr6:90639983-90639984(-) Y 3'UTR       26075521
chr6:90641468-90641469(-) m6A 3'UTR       27773535
chr6:90641583-90641584(-) m6A 3'UTR       27773535
chr6:90641602-90641603(-) m6A 3'UTR       27773535
chr6:90641609-90641610(-) m6A 3'UTR       27773535
chr6:90641708-90641709(-) m6A 3'UTR       27773535
chr6:90641742-90641743(-) m6A 3'UTR       27773535
chr6:90641790-90641791(-) m6A 3'UTR       27773535//22608085
chr6:90641848-90641849(-) m6A 3'UTR       27773535//22608085
chr6:90641903-90641904(-) m6A 3'UTR       27773535//22608085
chr6:90642027-90642028(-) m6A 3'UTR       24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642034-90642035(-) m6A 3'UTR       24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642150-90642151(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642190-90642191(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642203-90642204(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642216-90642217(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642228-90642229(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642245-90642246(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642267-90642268(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr6:90642318-90642319(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr6:90642391-90642392(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22608085
chr6:90642442-90642443(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22608085
chr6:90642450-90642451(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642505-90642506(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642541-90642542(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642549-90642550(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642591-90642592(-) m6A CDS       24981863//27773535
chr6:90647899-90647900(-) m6A CDS       27773535
chr6:90647904-90647905(-) m6A CDS       27773535
chr6:90647938-90647939(-) m6A CDS       27773535
chr6:90660135-90660136(-) m6A CDS       27371828
chr6:90660144-90660145(-) m6A CDS       27371828
chr6:90660269-90660270(-) m6A CDS       25456834//27371828
chr6:90660275-90660276(-) m6A CDS       25456834//24981863//27371828
chr6:90660281-90660282(-) m6A CDS       25456834//24981863//27371828
chr6:90660454-90660455(-) m6A CDS       25456834//24981863//27371828//22608085
chr6:90660460-90660461(-) m6A CDS       25456834//24981863//27371828//22608085
chr6:90660544-90660545(-) m6A CDS       25456834//24981863//27773535//22608085
chr6:90660561-90660562(-) m6A CDS       25456834//24981863//27773535//22608085
chr6:90660645-90660646(-) m6A CDS       24981863//27773535//22608085
chr6:90660677-90660678(-) m6A CDS       24981863//27773535//22608085
chr6:90660888-90660889(-) m6A CDS       24209618//25456834//24981863//27773535//27371828//22608085
chr6:90660895-90660896(-) m6A CDS       24209618//25456834//24981863//27773535//27371828//22608085
chr6:90660919-90660920(-) m6A CDS       24209618//25456834//24981863//27773535//27371828//22608085
chr6:90661180-90661181(-) m6A CDS       24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr6:90661276-90661277(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr6:90661351-90661352(-) m6A CDS       25456834//24981863//27773535//27371828//27773536//22608085
chr6:90661360-90661361(-) m6A CDS       25456834//24981863//27773535//27371828//27773536//22608085
chr6:90661420-90661421(-) m6A CDS       25456834//27371828//27773536//22608085
chr6:90661433-90661434(-) m6A CDS       25456834//27371828//27773536//22608085
chr6:90661456-90661457(-) m6A CDS       27371828//27773536//22608085
chr6:90661510-90661511(-) m6A CDS       27371828
chr6:91006289-91006290(-) m6A 5'UTR//exon       27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate kshv-miR-K12-7-3p
Exosome Jurkat-derived T cell line (J77cl20)     21505438
BACH2
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-7-3p
Interactor2: BACH2

Evidence Support:


Prediction-Evidence cRep//miRanda//Targetscan
Support Database RepTar//VmiReg

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