Basic Information:

  VIRBase ID:  

VHID00448701

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-7-3p:  MIMAT0002187          ZNF701:  NM_001172655     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-7-3p	ZNF701
miRBase Accession/Entrez ID	MIMAT0002187	55762
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF701	chr19:53087650(+) A-I      3'UTR chr19:53087636(+) A-I      3'UTR chr19:53087620(+) A-I      3'UTR chr19:53082547(+) A-I      intronic chr19:53082150(+) A-I      intronic chr19:53081392(+) A-I      intronic chr19:53080575(+) A-I      intronic chr19:53080573(+) A-I      intronic chr19:53080533(+) A-I      intronic chr19:53080514(+) A-I      intronic chr19:53080489(+) A-I      intronic chr19:53079532(+) A-I      intronic chr19:53079635(+) A-I      intronic chr19:53080432(+) A-I      intronic chr19:53080482(+) A-I      intronic chr19:53078773(+) A-I      intronic chr19:53089380(+) A-I      3'UTR chr19:53089556(+) A-I      3'UTR chr19:53080446(+) A-I      intronic chr19:53080371(+) A-I      intronic chr19:53083084(+) A-I      intronic chr19:53083214(+) A-I      intronic chr19:53080429(+) A-I      intronic chr19:53082032(+) A-I      intronic chr19:53084504(+) A-I      intronic chr19:53083059(+) A-I      intronic chr19:53081275(+) A-I      intronic chr19:53089769(+) A-I      3'UTR chr19:53082661(+) A-I      intronic chr19:53089770(+) A-I      3'UTR chr19:53083663(+) A-I      intronic chr19:53079647(+) A-I      intronic chr19:53079746(+) A-I      intronic chr19:53089555(+) A-I      3'UTR chr19:53079629(+) A-I      intronic chr19:53087633(+) A-I      3'UTR chr19:53079748(+) A-I      intronic chr19:53089557(+) A-I      3'UTR chr19:53081266(+) A-I      intronic chr19:53079555(+) A-I      intronic chr19:53080536(+) A-I      intronic chr19:53082629(+) A-I      intronic chr19:53081253(+) A-I      intronic chr19:53080414(+) A-I      intronic chr19:53079592(+) A-I      intronic chr19:53083016(+) A-I      intronic chr19:53084870(+) A-I      intronic chr19:53084550(+) A-I      intronic chr19:53079727(+) A-I      intronic chr19:53076460(+) A-I      intronic chr19:53080454(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNF701	chr19:53083059(+) A-G intron -    22484847 chr19:53087633(+) A-G intron -    22484847 chr19:53089557(+) A-G intron -    22484847 chr19:53089776(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF701	chr19:53059096-53059097(+) m6A exon       24284625 chr19:53059121-53059122(+) m6A exon       24284625//24981863 chr19:53059178-53059179(+) m6A exon       24284625//24981863 chr19:53059199-53059200(+) m6A exon       24284625//24981863 chr19:53059262-53059263(+) m6A exon       24284625//24981863 chr19:53059316-53059317(+) m6A intron       24284625 chr19:53059475-53059476(+) m6A intron       - chr19:53066846-53066847(+) m6A intron       24284625 chr19:53066879-53066880(+) m6A intron       24284625 chr19:53066919-53066920(+) m6A intron       - chr19:53066954-53066955(+) m6A intron       - chr19:53067013-53067014(+) m6A intron       - chr19:53067020-53067021(+) m6A intron       - chr19:53067029-53067030(+) m6A intron       - chr19:53067238-53067239(+) m6A intron       24284625//25456834 chr19:53067251-53067252(+) m6A intron       24284625//25456834 chr19:53067259-53067260(+) m6A intron       24284625//25456834 chr19:53067343-53067344(+) m6A intron       24284625 chr19:53067418-53067419(+) m6A intron       24284625//24981863 chr19:53067453-53067454(+) m6A intron       24284625//25456834//24981863 chr19:53067466-53067467(+) m6A intron       24284625//25456834//24981863 chr19:53067573-53067574(+) m6A intron       24981863 chr19:53067579-53067580(+) m6A intron       24981863 chr19:53077344-53077345(+) m6A 5'UTR//CDS//exon       25456834 chr19:53077364-53077365(+) m6A 5'UTR//CDS//exon       25456834 chr19:53085497-53085498(+) m6A CDS       22608085 chr19:53085528-53085529(+) m6A CDS       22608085 chr19:53085627-53085628(+) m6A CDS       22608085 chr19:53085657-53085658(+) m6A CDS       22608085 chr19:53086007-53086008(+) m6A CDS       24981863//22608085 chr19:53086030-53086031(+) m6A CDS       24981863//22608085 chr19:53086063-53086064(+) m6A CDS       24981863//22608085 chr19:53086666-53086667(+) m6A CDS       22608085 chr19:53086685-53086686(+) m6A CDS       22608085 chr19:53086746-53086747(+) m6A 3'UTR       22608085 chr19:53086765-53086766(+) m6A 3'UTR       22608085 chr19:53086783-53086784(+) m6A 3'UTR       22608085 chr19:53086868-53086869(+) m6A 3'UTR       22608085 chr19:53086952-53086953(+) m6A 3'UTR       25456834//24981863//22608085 chr19:53087036-53087037(+) m6A 3'UTR       24981863//22608085 chr19:53087093-53087094(+) m6A 3'UTR       22608085 chr19:53087155-53087156(+) m6A 3'UTR       22608085 chr19:53087364-53087365(+) m6A 3'UTR       - chr19:53087481-53087482(+) m6A 3'UTR       24981863//22608085 chr19:53087541-53087542(+) m6A 3'UTR       24284625//24981863//22608085 chr19:53088453-53088454(+) m6A 3'UTR       - chr19:53089985-53089986(+) m6A 3'UTR       25456834 chr19:53090061-53090062(+) m6A 3'UTR       25456834 chr19:53090088-53090089(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-7-3p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	ZNF701	Exosome Blood     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-7-3p
Interactor2: ZNF701

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg