Basic Information:

  VIRBase ID:  

VHID00448072

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-7-3p:  MIMAT0002187          MYL9:  NM_006097     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-7-3p	MYL9
miRBase Accession/Entrez ID	MIMAT0002187	10398
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	LC20//MLC-2C//MLC2//MRLC1//MYRL2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MYL9	chr20:35175750(+) A-I      intronic chr20:35173712(+) A-I      intronic chr20:35174056(+) A-I      intronic chr20:35175752(+) A-I      intronic chr20:35175759(+) A-I      intronic chr20:35175760(+) A-I      intronic chr20:35175764(+) A-I      intronic chr20:35175768(+) A-I      intronic chr20:35175772(+) A-I      intronic chr20:35175773(+) A-I      intronic chr20:35175782(+) A-I      intronic chr20:35175807(+) A-I      intronic chr20:35175810(+) A-I      intronic chr20:35175315(+) A-I      intronic chr20:35175811(+) A-I      intronic chr20:35176024(+) A-I      intronic chr20:35176036(+) A-I      intronic chr20:35175763(+) A-I      intronic chr20:35176045(+) A-I      intronic chr20:35176046(+) A-I      intronic chr20:35176050(+) A-I      intronic chr20:35174037(+) A-I      intronic chr20:35175739(+) A-I      intronic chr20:35175730(+) A-I      intronic chr20:35175731(+) A-I      intronic chr20:35175735(+) A-I      intronic chr20:35175740(+) A-I      intronic chr20:35173700(+) A-I      intronic chr20:35175271(+) A-I      intronic chr20:35175112(+) A-I      intronic chr20:35175074(+) A-I      intronic chr20:35175061(+) A-I      intronic chr20:35175039(+) A-I      intronic chr20:35174219(+) A-I      intronic chr20:35174148(+) A-I      intronic chr20:35174146(+) A-I      intronic chr20:35174084(+) A-I      intronic chr20:35175744(+) A-I      intronic chr20:35175106(+) A-I      intronic chr20:35175093(+) A-I      intronic chr20:35175087(+) A-I      intronic chr20:35175049(+) A-I      intronic chr20:35175043(+) A-I      intronic chr20:35175042(+) A-I      intronic chr20:35175037(+) A-I      intronic chr20:35174310(+) A-I      intronic chr20:35174273(+) A-I      intronic chr20:35174251(+) A-I      intronic chr20:35174244(+) A-I      intronic chr20:35174243(+) A-I      intronic chr20:35174212(+) A-I      intronic chr20:35174172(+) A-I      intronic chr20:35174171(+) A-I      intronic chr20:35174167(+) A-I      intronic chr20:35174155(+) A-I      intronic chr20:35175113(+) A-I      intronic chr20:35173651(+) A-I      intronic chr20:35173654(+) A-I      intronic chr20:35173715(+) A-I      intronic chr20:35173721(+) A-I      intronic chr20:35173722(+) A-I      intronic chr20:35173723(+) A-I      intronic chr20:35173734(+) A-I      intronic chr20:35173737(+) A-I      intronic chr20:35173738(+) A-I      intronic chr20:35173741(+) A-I      intronic chr20:35173743(+) A-I      intronic chr20:35173747(+) A-I      intronic chr20:35173748(+) A-I      intronic chr20:35173749(+) A-I      intronic chr20:35173750(+) A-I      intronic chr20:35173758(+) A-I      intronic chr20:35173789(+) A-I      intronic chr20:35173806(+) A-I      intronic chr20:35175274(+) A-I      intronic chr20:35175290(+) A-I      intronic chr20:35175287(+) A-I      intronic chr20:35175276(+) A-I      intronic chr20:35173740(+) A-I      intronic chr20:35174087(+) A-I      intronic chr20:35173820(+) A-I      intronic chr20:35173828(+) A-I      intronic chr20:35173895(+) A-I      intronic chr20:35174070(+) A-I      intronic chr20:35175265(+) A-I      intronic chr20:35175262(+) A-I      intronic chr20:35175261(+) A-I      intronic chr20:35175233(+) A-I      intronic chr20:35175222(+) A-I      intronic chr20:35175202(+) A-I      intronic chr20:35175187(+) A-I      intronic chr20:35175179(+) A-I      intronic chr20:35175178(+) A-I      intronic chr20:35175154(+) A-I      intronic chr20:35175130(+) A-I      intronic chr20:35175115(+) A-I      intronic chr20:35174079(+) A-I      intronic chr20:35174180(+) A-I      intronic chr20:35174272(+) A-I      intronic chr20:35174181(+) A-I      intronic chr20:35174156(+) A-I      intronic chr20:35174173(+) A-I      intronic chr20:35173713(+) A-I      intronic chr20:35174078(+) A-I      intronic chr20:35173753(+) A-I      intronic chr20:35174179(+) A-I      intronic chr20:35174170(+) A-I      intronic chr20:35174185(+) A-I      intronic chr20:35173821(+) A-I      intronic chr20:35174182(+) A-I      intronic chr20:35174176(+) A-I      intronic chr20:35175165(+) A-I      intronic chr20:35175142(+) A-I      intronic chr20:35175196(+) A-I      intronic chr20:35173637(+) A-I      intronic chr20:35173646(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MYL9	chr20:35170667(+) A-I intron -    15342557 chr20:35173637(+) A-I intron -    15258596 chr20:35173645(+) A-I intron -    15342557   //15258596 chr20:35173646(+) A-I intron -    15342557   //15258596 chr20:35173667(+) A-I intron -    15258596 chr20:35173713(+) A-I intron -    15342557   //15258596 chr20:35173753(+) A-I intron -    15342557 chr20:35173779(+) A-I intron -    15342557 chr20:35173785(+) A-I intron -    15342557 chr20:35173821(+) A-I intron -    15342557 chr20:35175142(+) A-I intron -    15258596 chr20:35175152(+) A-I intron -    15258596 chr20:35175165(+) A-I intron -    15258596 chr20:35175193(+) A-I intron -    15258596 chr20:35175196(+) A-I intron -    15258596 chr20:35175213(+) A-I intron -    15258596 chr20:35175283(+) A-I intron -    15258596

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MYL9	chr20:35169905-35169906(+) m6A 5'UTR       24284625//25456834//24981863 chr20:35173314-35173315(+) m6A CDS       24284625//25456834//24981863//22575960 chr20:35173417-35173418(+) m6A CDS       24284625//24981863//22575960 chr20:35173444-35173445(+) m6A CDS       24284625//24981863 chr20:35176440-35176441(+) m6A CDS//intron       24284625 chr20:35177791-35177792(+) m6A 3'UTR       24284625//22575960 chr20:35177884-35177885(+) m6A 3'UTR       24284625//25456834//22575960 chr20:35177898-35177899(+) m6A 3'UTR       24284625//25456834//22575960 chr20:35177917-35177918(+) m6A 3'UTR       24284625//25456834//22575960 chr20:35178025-35178026(+) m6A 3'UTR       24284625//25456834//22575960 chr20:35178176-35178177(+) m6A 3'UTR       24284625//24981863//22575960 chr20:35178213-35178214(+) m6A 3'UTR       24284625//24981863 chr20:35179578-35179579(+) m6A 3'UTR       - chr20:35179604-35179605(+) m6A 3'UTR       - chr20:35179672-35179673(+) m6A 3'UTR       - chr20:35179689-35179690(+) m6A 3'UTR       - chr20:35179703-35179704(+) m6A 3'UTR       - chr20:35179712-35179713(+) m6A 3'UTR       - chr20:35179733-35179734(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-7-3p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	MYL9	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-7-3p
Interactor2: MYL9

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg