Basic Information:

  VIRBase ID:  

VHID00447114

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-7-3p:  MIMAT0002187          AVPR1B:  NM_000707     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-7-3p	AVPR1B
miRBase Accession/Entrez ID	MIMAT0002187	553
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AVPR3//V1bR

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	AVPR1B	chr1:206228590(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AVPR1B	chr1:206225175-206225176(+) m6A CDS//intron       25456834 chr1:206225182-206225183(+) m6A CDS//intron       25456834 chr1:206231092-206231093(+) m6A CDS//exon       25456834 chr1:206231127-206231128(+) m6A CDS//exon       25456834 chr1:206231147-206231148(+) m6A 3'UTR//exon       25456834 chr1:206231176-206231177(+) m6A 3'UTR//exon       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-7-3p	Exosome Jurkat-derived T cell line (J77cl20)     21505438

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-7-3p
Interactor2: AVPR1B

Evidence Support:

Prediction-Evidence	cRep//PITA
Support Database	RepTar//VmiReg