Detail Information

Basic Information:


  VIRBase ID:  

VHID00447102

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-7-3p:           AQP5:      

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Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-7-3p AQP5
miRBase
Accession/Entrez ID
MIMAT0002187 362
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA mRNA
Alias - AQP-5//PPKB

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase AQP5
chr12:50359115-50359116(+) m6A 3'UTR       25456834
chr12:50359127-50359128(+) m6A 3'UTR       25456834
chr12:50359166-50359167(+) m6A 3'UTR       25456834
chr12:50359181-50359182(+) m6A 3'UTR       25456834
chr12:50359331-50359332(+) m6A 3'UTR       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate kshv-miR-K12-7-3p
Exosome Jurkat-derived T cell line (J77cl20)     21505438
AQP5
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-7-3p
Interactor2: AQP5

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid
Support Database VmiReg

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