Basic Information:

  VIRBase ID:  

VHID00447098

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-7-3p:  MIMAT0002187          SLC25A4:  NM_001151     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-7-3p	SLC25A4
miRBase Accession/Entrez ID	MIMAT0002187	291
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AAC1//ANT//ANT 1//ANT1//MTDPS12//MTDPS12A//PEO2//PEO3//PEOA2//T1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC25A4	chr4:186069110(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC25A4	chr4:186066209-186066210(+) m6A CDS       - chr4:186066220-186066221(+) m6A CDS       - chr4:186068135-186068136(+) m6A 3'UTR       27773535 chr4:186068160-186068161(+) m6A 3'UTR       27773535 chr4:186068202-186068203(+) m6A 3'UTR       27773535 chr4:186068238-186068239(+) m6A 3'UTR       27773535 chr4:186068243-186068244(+) m6A 3'UTR       27773535 chr4:186068290-186068291(+) m6A 3'UTR       27773535 chr4:186068400-186068401(+) m6A 3'UTR       27773535 chr4:186068412-186068413(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-7-3p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	SLC25A4	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-7-3p
Interactor2: SLC25A4

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg