Basic Information:

  VIRBase ID:  

VHID00447096

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-7-3p:  MIMAT0002187          ALK:  NM_004304     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-7-3p	ALK
miRBase Accession/Entrez ID	MIMAT0002187	238
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CD246//NBLST3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ALK	chr2:29750522(-) A-I      intronic chr2:30009754(-) A-I      intronic chr2:29750538(-) A-I      intronic chr2:30009733(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ALK	chr2:30143925-30143926(-) m6A 5'UTR       25456834 chr2:30143999-30144000(-) m6A 5'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-7-3p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	ALK	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-7-3p
Interactor2: ALK

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg