Basic Information:

  VIRBase ID:  

VHID00446736

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-8-3p:  MIMAT0002186          RC3H2:  NM_001354482     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-8-3p	RC3H2
miRBase Accession/Entrez ID	MIMAT0002186	54542
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MNAB//RNF164

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RC3H2	chr9:125657626(-) A-I      intronic chr9:125657625(-) A-I      intronic chr9:125638724(-) A-I      intronic chr9:125664879(-) A-I      intronic chr9:125664034(-) A-I      intronic chr9:125664009(-) A-I      intronic chr9:125663966(-) A-I      intronic chr9:125661514(-) A-I      intronic chr9:125661458(-) A-I      intronic chr9:125661454(-) A-I      intronic chr9:125648406(-) A-I      intronic chr9:125648396(-) A-I      intronic chr9:125648370(-) A-I      intronic chr9:125648363(-) A-I      intronic chr9:125648351(-) A-I      intronic chr9:125648344(-) A-I      intronic chr9:125615887(-) A-I      intronic chr9:125638905(-) A-I      intronic chr9:125665126(-) A-I      intronic chr9:125664482(-) A-I      intronic chr9:125664467(-) A-I      intronic chr9:125664466(-) A-I      intronic chr9:125664437(-) A-I      intronic chr9:125664105(-) A-I      intronic chr9:125664008(-) A-I      intronic chr9:125663992(-) A-I      intronic chr9:125661642(-) A-I      intronic chr9:125661619(-) A-I      intronic chr9:125661488(-) A-I      intronic chr9:125661450(-) A-I      intronic chr9:125661449(-) A-I      intronic chr9:125661442(-) A-I      intronic chr9:125661434(-) A-I      intronic chr9:125660971(-) A-I      intronic chr9:125660946(-) A-I      intronic chr9:125660826(-) A-I      intronic chr9:125660799(-) A-I      intronic chr9:125657726(-) A-I      intronic chr9:125657648(-) A-I      intronic chr9:125657640(-) A-I      intronic chr9:125657507(-) A-I      intronic chr9:125657491(-) A-I      intronic chr9:125655721(-) A-I      intronic chr9:125655657(-) A-I      intronic chr9:125655569(-) A-I      intronic chr9:125655561(-) A-I      intronic chr9:125647010(-) A-I      intronic chr9:125646151(-) A-I      intronic chr9:125646068(-) A-I      intronic chr9:125646067(-) A-I      intronic chr9:125641667(-) A-I      intronic chr9:125641560(-) A-I      intronic chr9:125641549(-) A-I      intronic chr9:125641544(-) A-I      intronic chr9:125641418(-) A-I      intronic chr9:125641136(-) A-I      intronic chr9:125641117(-) A-I      intronic chr9:125639473(-) A-I      intronic chr9:125638825(-) A-I      intronic chr9:125638820(-) A-I      intronic chr9:125638795(-) A-I      intronic chr9:125638735(-) A-I      intronic chr9:125638718(-) A-I      intronic chr9:125635749(-) A-I      intronic chr9:125635747(-) A-I      intronic chr9:125635116(-) A-I      intronic chr9:125635028(-) A-I      intronic chr9:125634314(-) A-I      intronic chr9:125634302(-) A-I      intronic chr9:125632491(-) A-I      intronic chr9:125626297(-) A-I      intronic chr9:125626289(-) A-I      intronic chr9:125626186(-) A-I      intronic chr9:125626127(-) A-I      intronic chr9:125626112(-) A-I      intronic chr9:125626092(-) A-I      intronic chr9:125626030(-) A-I      intronic chr9:125625117(-) A-I      intronic chr9:125625112(-) A-I      intronic chr9:125625091(-) A-I      intronic chr9:125625017(-) A-I      intronic chr9:125625008(-) A-I      intronic chr9:125623604(-) A-I      intronic chr9:125623526(-) A-I      intronic chr9:125622920(-) A-I      intronic chr9:125622919(-) A-I      intronic chr9:125622870(-) A-I      intronic chr9:125615903(-) A-I      intronic chr9:125615882(-) A-I      intronic chr9:125615814(-) A-I      intronic chr9:125661022(-) A-I      intronic chr9:125632099(-) A-I      intronic chr9:125639618(-) A-I      intronic chr9:125660981(-) A-I      intronic chr9:125635748(-) A-I      intronic chr9:125661484(-) A-I      intronic chr9:125635002(-) A-I      intronic chr9:125624972(-) A-I      intronic chr9:125664913(-) A-I      intronic chr9:125665049(-) A-I      intronic chr9:125624917(-) A-I      intronic chr9:125650201(-) A-I      intronic chr9:125657047(-) A-I      intronic chr9:125641573(-) A-I      intronic chr9:125657531(-) A-I      intronic chr9:125626177(-) A-I      intronic chr9:125615992(-) A-I      intronic chr9:125632896(-) A-I      intronic chr9:125639631(-) A-I      intronic chr9:125638824(-) A-I      intronic chr9:125641591(-) A-I      intronic chr9:125661636(-) A-I      intronic chr9:125635762(-) A-I      intronic chr9:125638663(-) A-I      intronic chr9:125634969(-) A-I      intronic chr9:125635916(-) A-I      intronic chr9:125641610(-) A-I      intronic chr9:125631309(-) A-I      intronic chr9:125664376(-) A-I      intronic chr9:125664053(-) A-I      intronic chr9:125622944(-) A-I      intronic chr9:125622831(-) A-I      intronic chr9:125664983(-) A-I      intronic chr9:125639464(-) A-I      intronic chr9:125657083(-) A-I      intronic chr9:125641152(-) A-I      intronic chr9:125652162(-) A-I      intronic chr9:125632497(-) A-I      intronic chr9:125656475(-) A-I      intronic chr9:125635868(-) A-I      intronic chr9:125641260(-) A-I      intronic chr9:125664922(-) A-I      intronic chr9:125655705(-) A-I      intronic chr9:125627093(-) A-I      intronic chr9:125622868(-) A-I      intronic chr9:125641611(-) A-I      intronic chr9:125641184(-) A-I      intronic chr9:125615883(-) A-I      intronic chr9:125622860(-) A-I      intronic chr9:125625052(-) A-I      intronic chr9:125615909(-) A-I      intronic chr9:125634226(-) A-I      intronic chr9:125622791(-) A-I      intronic chr9:125626971(-) A-I      intronic chr9:125635805(-) A-I      intronic chr9:125665086(-) A-I      intronic chr9:125632124(-) A-I      intronic chr9:125627175(-) A-I      intronic chr9:125664491(-) A-I      intronic chr9:125638823(-) A-I      intronic chr9:125657585(-) A-I      intronic chr9:125648304(-) A-I      intronic chr9:125665019(-) A-I      intronic chr9:125655710(-) A-I      intronic chr9:125626083(-) A-I      intronic chr9:125635757(-) A-I      intronic chr9:125641561(-) A-I      intronic chr9:125638662(-) A-I      intronic chr9:125665045(-) A-I      intronic chr9:125635001(-) A-I      intronic chr9:125665055(-) A-I      intronic chr9:125639526(-) A-I      intronic chr9:125656993(-) A-I      intronic chr9:125635880(-) A-I      intronic chr9:125661542(-) A-I      intronic chr9:125635833(-) A-I      intronic chr9:125660906(-) A-I      intronic chr9:125622875(-) A-I      intronic chr9:125633715(-) A-I      intronic chr9:125641263(-) A-I      intronic chr9:125632488(-) A-I      intronic chr9:125633869(-) A-I      intronic chr9:125664094(-) A-I      intronic chr9:125660928(-) A-I      intronic chr9:125627100(-) A-I      intronic chr9:125664939(-) A-I      intronic chr9:125648342(-) A-I      intronic chr9:125635910(-) A-I      intronic chr9:125641492(-) A-I      intronic chr9:125660945(-) A-I      intronic chr9:125660986(-) A-I      intronic chr9:125657097(-) A-I      intronic chr9:125638759(-) A-I      intronic chr9:125665048(-) A-I      intronic chr9:125664867(-) A-I      intronic chr9:125657623(-) A-I      intronic chr9:125641472(-) A-I      intronic chr9:125663976(-) A-I      intronic chr9:125625088(-) A-I      intronic chr9:125657506(-) A-I      intronic chr9:125623706(-) A-I      intronic chr9:125625065(-) A-I      intronic chr9:125638758(-) A-I      intronic chr9:125639463(-) A-I      intronic chr9:125665009(-) A-I      intronic chr9:125648881(-) A-I      intronic chr9:125638783(-) A-I      intronic chr9:125664926(-) A-I      intronic chr9:125635892(-) A-I      intronic chr9:125638690(-) A-I      intronic chr9:125661498(-) A-I      intronic chr9:125634256(-) A-I      intronic chr9:125615774(-) A-I      intronic chr9:125638702(-) A-I      intronic chr9:125660772(-) A-I      intronic chr9:125661510(-) A-I      intronic chr9:125618634(-) A-I      intronic chr9:125622900(-) A-I      intronic chr9:125656349(-) A-I      intronic chr9:125635822(-) A-I      intronic chr9:125622943(-) A-I      intronic chr9:125640824(-) A-I      intronic chr9:125623709(-) A-I      intronic chr9:125635905(-) A-I      intronic chr9:125641195(-) A-I      intronic chr9:125625074(-) A-I      intronic chr9:125650163(-) A-I      intronic chr9:125664035(-) A-I      intronic chr9:125638807(-) A-I      intronic chr9:125641651(-) A-I      intronic chr9:125639508(-) A-I      intronic chr9:125624956(-) A-I      intronic chr9:125660857(-) A-I      intronic chr9:125635870(-) A-I      intronic chr9:125648950(-) A-I      intronic chr9:125622790(-) A-I      intronic chr9:125664373(-) A-I      intronic chr9:125631319(-) A-I      intronic chr9:125647085(-) A-I      intronic chr9:125625111(-) A-I      intronic chr9:125661551(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	RC3H2	chr9:125636234(-) A-I intron -    15258596 chr9:125636235(-) A-I intron -    15258596 chr9:125636998(-) A-I intron -    15258596 chr9:125637072(-) A-I intron -    15258596 chr9:125622791(-) A-I intron -    22327324 chr9:125635870(-) A-I intron -    21960545   //22327324 chr9:125622791(-) A-G intron -    22484847 chr9:125622860(-) A-G intron -    22484847 chr9:125623794(-) C-T intron -    22484847 chr9:125624917(-) A-G intron -    22484847 chr9:125635002(-) A-G intron -    22484847 chr9:125635833(-) A-G intron -    22484847 chr9:125635870(-) A-G intron -    22484847 chr9:125636234(-) A-G intron -    22484847 chr9:125636235(-) A-G intron -    22484847 chr9:125636998(-) A-G intron -    22484847 chr9:125638662(-) A-G intron -    22484847 chr9:125638823(-) A-G intron -    22484847 chr9:125648950(-) A-G intron -    22484847 chr9:125664064(-) A-G intron -    22484847 chr9:125664867(-) A-G intron -    22484847 chr9:125664983(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RC3H2	chr9:125607040-125607041(-) m6A 3'UTR       24981863 chr9:125607085-125607086(-) m6A 3'UTR       24981863 chr9:125608044-125608045(-) m6A 3'UTR       24981863 chr9:125608062-125608063(-) m6A 3'UTR       24981863 chr9:125608131-125608132(-) m6A 3'UTR       24981863//22608085 chr9:125608205-125608206(-) m6A 3'UTR       24981863//22608085 chr9:125608959-125608960(-) m6A 3'UTR       27773535//22608085 chr9:125609092-125609093(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr9:125611769-125611770(-) m6A 3'UTR       27773535//22608085 chr9:125611938-125611939(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085 chr9:125611976-125611977(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085 chr9:125612087-125612088(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//27371828//22608085 chr9:125613371-125613372(-) m6A 3'UTR//CDS//exon//intron       24284625//24981863//27773535//27371828//22608085 chr9:125613388-125613389(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//27371828//22608085 chr9:125613497-125613498(-) m6A 3'UTR//CDS//exon       24981863//27773535 chr9:125613610-125613611(-) m6A 3'UTR//CDS//exon       24981863//27773535 chr9:125613619-125613620(-) m6A 3'UTR//CDS//exon       27773535 chr9:125613628-125613629(-) m6A 3'UTR//CDS//exon       27773535 chr9:125616103-125616104(-) m6A 3'UTR//intron       27773535 chr9:125616472-125616473(-) m6A 3'UTR//CDS       - chr9:125616488-125616489(-) m6A 3'UTR//CDS       - chr9:125616542-125616543(-) m6A 3'UTR//CDS       - chr9:125620350-125620351(-) m6A 3'UTR//CDS       27773535 chr9:125620369-125620370(-) m6A 3'UTR//CDS       27773535 chr9:125620967-125620968(-) m6A 3'UTR//CDS       27773535 chr9:125621187-125621188(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr9:125622198-125622199(-) m6A 3'UTR//CDS       27773535 chr9:125622234-125622235(-) m6A 3'UTR//CDS       27773535 chr9:125622260-125622261(-) m6A 3'UTR//CDS       27773535 chr9:125622336-125622337(-) m6A 3'UTR//CDS       27773535 chr9:125622387-125622388(-) m6A 3'UTR//CDS       27773535 chr9:125627703-125627704(-) m6A 3'UTR//CDS       27773535 chr9:125652658-125652659(-) m6A CDS//exon       27773535 chr9:125652678-125652679(-) m6A CDS//exon       27773535 chr9:125652689-125652690(-) m6A CDS//exon       27773535 chr9:125652736-125652737(-) Am CDS//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-8-3p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	RC3H2	Cytoplasm OSCC cell lines (Cal27|HN4)     32163895 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-8-3p
Interactor2: RC3H2

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg