Basic Information:

  VIRBase ID:  

VHID00446390

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-8-3p:  MIMAT0002186          ID1:  NM_181353     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-8-3p	ID1
miRBase Accession/Entrez ID	MIMAT0002186	3397
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bHLHb24//ID

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ID1	chr20:30193259-30193260(+) m6A CDS       24209618//24981863//22575960 chr20:30193446-30193447(+) m6A CDS       26404942//27773535//22575960 chr20:30193500-30193501(+) m6A CDS       26404942//27773535//22575960 chr20:30193518-30193519(+) m6A CDS       26404942//27773535//22575960 chr20:30193538-30193539(+) m6A CDS       26404942//27773535//22575960 chr20:30193913-30193914(+) m6A 3'UTR       24981863//22575960 chr20:30193921-30193922(+) m6A 3'UTR       24981863//22575960 chr20:30194000-30194001(+) m6A 3'UTR       24284625//24981863//22575960 chr20:30194005-30194006(+) m6A 3'UTR       24284625//24981863//22575960 chr20:30194111-30194112(+) m6A 3'UTR       24284625//24981863//27773535//22575960 chr20:30194161-30194162(+) m6A 3'UTR       24981863//27773535//22575960 chr20:30194294-30194295(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-8-3p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	ID1	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-8-3p
Interactor2: ID1

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg