Basic Information:

  VIRBase ID:  

VHID00446322

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.5711

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-8-3p:  MIMAT0002186          AP1G1:  NM_001030007     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-8-3p	AP1G1
miRBase Accession/Entrez ID	MIMAT0002186	164
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ADTG//CLAPG1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AP1G1	chr16:71827705(-) A-I      intronic chr16:71834786(-) A-I      intronic chr16:71778643(-) A-I      intronic chr16:71778658(-) A-I      intronic chr16:71778667(-) A-I      intronic chr16:71784495(-) A-I      intronic chr16:71784496(-) A-I      intronic chr16:71827673(-) A-I      intronic chr16:71834815(-) A-I      intronic chr16:71832299(-) A-I      intronic chr16:71832305(-) A-I      intronic chr16:71827710(-) A-I      intronic chr16:71827721(-) A-I      intronic chr16:71832328(-) A-I      intronic chr16:71834749(-) A-I      intronic chr16:71834750(-) A-I      intronic chr16:71832298(-) A-I      intronic chr16:71776873(-) A-I      intronic chr16:71834776(-) A-I      intronic chr16:71785170(-) A-I      intronic chr16:71820488(-) A-I      intronic chr16:71820478(-) A-I      intronic chr16:71819698(-) A-I      intronic chr16:71819637(-) A-I      intronic chr16:71819636(-) A-I      intronic chr16:71819620(-) A-I      intronic chr16:71819431(-) A-I      intronic chr16:71819395(-) A-I      intronic chr16:71819331(-) A-I      intronic chr16:71830042(-) A-I      intronic chr16:71832266(-) A-I      intronic chr16:71832308(-) A-I      intronic chr16:71832358(-) A-I      intronic chr16:71832643(-) A-I      intronic chr16:71833614(-) A-I      intronic chr16:71819262(-) A-I      intronic chr16:71818708(-) A-I      intronic chr16:71818693(-) A-I      intronic chr16:71818644(-) A-I      intronic chr16:71818632(-) A-I      intronic chr16:71818496(-) A-I      intronic chr16:71814994(-) A-I      intronic chr16:71814993(-) A-I      intronic chr16:71784936(-) A-I      intronic chr16:71836262(-) A-I      intronic chr16:71814721(-) A-I      intronic chr16:71814347(-) A-I      intronic chr16:71836266(-) A-I      intronic chr16:71812360(-) A-I      intronic chr16:71807794(-) A-I      intronic chr16:71836267(-) A-I      intronic chr16:71836308(-) A-I      intronic chr16:71836533(-) A-I      intronic chr16:71836570(-) A-I      intronic chr16:71836586(-) A-I      intronic chr16:71836631(-) A-I      intronic chr16:71799186(-) A-I      intronic chr16:71799184(-) A-I      intronic chr16:71799173(-) A-I      intronic chr16:71836709(-) A-I      intronic chr16:71836715(-) A-I      intronic chr16:71837741(-) A-I      intronic chr16:71837780(-) A-I      intronic chr16:71838069(-) A-I      intronic chr16:71838213(-) A-I      intronic chr16:71789617(-) A-I      intronic chr16:71821074(-) A-I      intronic chr16:71838432(-) A-I      intronic chr16:71838490(-) A-I      intronic chr16:71838703(-) A-I      intronic chr16:71838803(-) A-I      intronic chr16:71838912(-) A-I      intronic chr16:71839226(-) A-I      intronic chr16:71798996(-) A-I      intronic chr16:71794731(-) A-I      intronic chr16:71794723(-) A-I      intronic chr16:71794722(-) A-I      intronic chr16:71794544(-) A-I      intronic chr16:71794532(-) A-I      intronic chr16:71794530(-) A-I      intronic chr16:71794266(-) A-I      intronic chr16:71794046(-) A-I      intronic chr16:71794045(-) A-I      intronic chr16:71794041(-) A-I      intronic chr16:71794025(-) A-I      intronic chr16:71839227(-) A-I      intronic chr16:71839229(-) A-I      intronic chr16:71769851(-) A-I      intronic chr16:71769871(-) A-I      intronic chr16:71769922(-) A-I      intronic chr16:71770408(-) A-I      intronic chr16:71770412(-) A-I      intronic chr16:71778015(-) A-I      intronic chr16:71778038(-) A-I      intronic chr16:71778047(-) A-I      intronic chr16:71778065(-) A-I      intronic chr16:71778100(-) A-I      intronic chr16:71783093(-) A-I      intronic chr16:71783325(-) A-I      intronic chr16:71784335(-) A-I      intronic chr16:71784385(-) A-I      intronic chr16:71784390(-) A-I      intronic chr16:71784485(-) A-I      intronic chr16:71794024(-) A-I      intronic chr16:71789820(-) A-I      intronic chr16:71789726(-) A-I      intronic chr16:71840346(-) A-I      intronic chr16:71840360(-) A-I      intronic chr16:71784486(-) A-I      intronic chr16:71784498(-) A-I      intronic chr16:71784512(-) A-I      intronic chr16:71784546(-) A-I      intronic chr16:71784569(-) A-I      intronic chr16:71784577(-) A-I      intronic chr16:71784863(-) A-I      intronic chr16:71784866(-) A-I      intronic chr16:71840374(-) A-I      intronic chr16:71812365(-) A-I      intronic chr16:71836708(-) A-I      intronic chr16:71785001(-) A-I      intronic chr16:71785166(-) A-I      intronic chr16:71785184(-) A-I      intronic chr16:71787950(-) A-I      intronic chr16:71788004(-) A-I      intronic chr16:71789283(-) A-I      intronic chr16:71789326(-) A-I      intronic chr16:71789334(-) A-I      intronic chr16:71789579(-) A-I      intronic chr16:71789616(-) A-I      intronic chr16:71820502(-) A-I      intronic chr16:71820520(-) A-I      intronic chr16:71820528(-) A-I      intronic chr16:71820590(-) A-I      intronic chr16:71821047(-) A-I      intronic chr16:71821056(-) A-I      intronic chr16:71821122(-) A-I      intronic chr16:71821189(-) A-I      intronic chr16:71825526(-) A-I      intronic chr16:71825694(-) A-I      intronic chr16:71825702(-) A-I      intronic chr16:71825762(-) A-I      intronic chr16:71825803(-) A-I      intronic chr16:71825838(-) A-I      intronic chr16:71825843(-) A-I      intronic chr16:71825944(-) A-I      intronic chr16:71827660(-) A-I      intronic chr16:71827893(-) A-I      intronic chr16:71827894(-) A-I      intronic chr16:71830030(-) A-I      intronic chr16:71830032(-) A-I      intronic chr16:71814008(-) A-I      intronic chr16:71777602(-) A-I      intronic chr16:71809208(-) A-I      intronic chr16:71827858(-) A-I      intronic chr16:71814283(-) A-I      intronic chr16:71784592(-) A-I      intronic chr16:71784910(-) A-I      intronic chr16:71834448(-) A-I      intronic chr16:71827018(-) A-I      intronic chr16:71818599(-) A-I      intronic chr16:71793189(-) A-I      intronic chr16:71838058(-) A-I      intronic chr16:71838374(-) A-I      intronic chr16:71785054(-) A-I      intronic chr16:71837070(-) A-I      intronic chr16:71836720(-) A-I      intronic chr16:71794225(-) A-I      intronic chr16:71822681(-) A-I      intronic chr16:71777424(-) A-I      intronic chr16:71836238(-) A-I      intronic chr16:71790662(-) A-I      intronic chr16:71778619(-) A-I      intronic chr16:71836737(-) A-I      intronic chr16:71838114(-) A-I      intronic chr16:71782994(-) A-I      intronic chr16:71826996(-) A-I      intronic chr16:71777342(-) A-I      intronic chr16:71822675(-) A-I      intronic chr16:71784958(-) A-I      intronic chr16:71836926(-) A-I      intronic chr16:71809003(-) A-I      intronic chr16:71788651(-) A-I      intronic chr16:71789722(-) A-I      intronic chr16:71821082(-) A-I      intronic chr16:71837656(-) A-I      intronic chr16:71776655(-) A-I      intronic chr16:71836861(-) A-I      intronic chr16:71820800(-) A-I      intronic chr16:71827814(-) A-I      intronic chr16:71834540(-) A-I      intronic chr16:71778103(-) A-I      intronic chr16:71770770(-) A-I      intronic chr16:71838117(-) A-I      intronic chr16:71833559(-) A-I      intronic chr16:71838527(-) A-I      intronic chr16:71830026(-) A-I      intronic chr16:71794235(-) A-I      intronic chr16:71838435(-) A-I      intronic chr16:71838126(-) A-I      intronic chr16:71793973(-) A-I      intronic chr16:71814606(-) A-I      intronic chr16:71783000(-) A-I      intronic chr16:71794745(-) A-I      intronic chr16:71818522(-) A-I      intronic chr16:71782987(-) A-I      intronic chr16:71836551(-) A-I      intronic chr16:71825563(-) A-I      intronic chr16:71821137(-) A-I      intronic chr16:71834515(-) A-I      intronic chr16:71777406(-) A-I      intronic chr16:71818600(-) A-I      intronic chr16:71789146(-) A-I      intronic chr16:71827745(-) A-I      intronic chr16:71784522(-) A-I      intronic chr16:71784591(-) A-I      intronic chr16:71778064(-) A-I      intronic chr16:71783291(-) A-I      intronic chr16:71814312(-) A-I      intronic chr16:71840417(-) A-I      intronic chr16:71788517(-) A-I      intronic chr16:71841149(-) A-I      intronic chr16:71788014(-) A-I      intronic chr16:71784895(-) A-I      intronic chr16:71777394(-) A-I      intronic chr16:71782980(-) A-I      intronic chr16:71833450(-) A-I      intronic chr16:71795684(-) A-I      intronic chr16:71841163(-) A-I      intronic chr16:71789687(-) A-I      intronic chr16:71784462(-) A-I      intronic chr16:71770422(-) A-I      intronic chr16:71837065(-) A-I      intronic chr16:71777498(-) A-I      intronic chr16:71836403(-) A-I      intronic chr16:71783213(-) A-I      intronic chr16:71778751(-) A-I      intronic chr16:71812503(-) A-I      intronic chr16:71816204(-) A-I      intronic chr16:71836550(-) A-I      intronic chr16:71814017(-) A-I      intronic chr16:71819261(-) A-I      intronic chr16:71784803(-) A-I      intronic chr16:71837745(-) A-I      intronic chr16:71838716(-) A-I      intronic chr16:71788047(-) A-I      intronic chr16:71777980(-) A-I      intronic chr16:71822685(-) A-I      intronic chr16:71784911(-) A-I      intronic chr16:71825476(-) A-I      intronic chr16:71812534(-) A-I      intronic chr16:71807868(-) A-I      intronic chr16:71812438(-) A-I      intronic chr16:71827848(-) A-I      intronic chr16:71788060(-) A-I      intronic chr16:71824295(-) A-I      intronic chr16:71770586(-) A-I      intronic chr16:71825761(-) A-I      intronic chr16:71839812(-) A-I      intronic chr16:71794640(-) A-I      intronic chr16:71819282(-) A-I      intronic chr16:71837057(-) A-I      intronic chr16:71821037(-) A-I      intronic chr16:71821138(-) A-I      intronic chr16:71818558(-) A-I      intronic chr16:71813798(-) A-I      intronic chr16:71832144(-) A-I      intronic chr16:71818735(-) A-I      intronic chr16:71789828(-) A-I      intronic chr16:71784930(-) A-I      intronic chr16:71813382(-) A-I      intronic chr16:71832679(-) A-I      intronic chr16:71777423(-) A-I      intronic chr16:71832092(-) A-I      intronic chr16:71793401(-) A-I      intronic chr16:71838908(-) A-I      intronic chr16:71832297(-) A-I      intronic chr16:71818712(-) A-I      intronic chr16:71784815(-) A-I      intronic chr16:71778657(-) A-I      intronic chr16:71829935(-) A-I      intronic chr16:71820722(-) A-I      intronic chr16:71789742(-) A-I      intronic chr16:71813372(-) A-I      intronic chr16:71812384(-) A-I      intronic chr16:71770604(-) A-I      intronic chr16:71818622(-) A-I      intronic chr16:71820718(-) A-I      intronic chr16:71772234(-) A-I      intronic chr16:71827602(-) A-I      intronic chr16:71771234(-) A-I      intronic chr16:71836571(-) A-I      intronic chr16:71822851(-) A-I      intronic chr16:71784892(-) A-I      intronic chr16:71777686(-) A-I      intronic chr16:71838557(-) A-I      intronic chr16:71814924(-) A-I      intronic chr16:71808198(-) A-I      intronic chr16:71832304(-) A-I      intronic chr16:71808924(-) A-I      intronic chr16:71819313(-) A-I      intronic chr16:71794263(-) A-I      intronic chr16:71820721(-) A-I      intronic chr16:71794739(-) A-I      intronic chr16:71816594(-) A-I      intronic chr16:71820543(-) A-I      intronic chr16:71785011(-) A-I      intronic chr16:71809162(-) A-I      intronic chr16:71784353(-) A-I      intronic chr16:71837006(-) A-I      intronic chr16:71826874(-) A-I      intronic chr16:71827741(-) A-I      intronic chr16:71780027(-) A-I      intronic chr16:71837746(-) A-I      intronic chr16:71818638(-) A-I      intronic chr16:71802758(-) A-I      intronic chr16:71778506(-) A-I      intronic chr16:71835573(-) A-I      intronic chr16:71789724(-) A-I      intronic chr16:71819357(-) A-I      intronic chr16:71814273(-) A-I      intronic chr16:71839913(-) A-I      intronic chr16:71838439(-) A-I      intronic chr16:71783299(-) A-I      intronic chr16:71784456(-) A-I      intronic chr16:71841078(-) A-I      intronic chr16:71820980(-) A-I      intronic chr16:71769837(-) A-I      intronic chr16:71819236(-) A-I      intronic chr16:71788512(-) A-I      intronic chr16:71836682(-) A-I      intronic chr16:71833468(-) A-I      intronic chr16:71770399(-) A-I      intronic chr16:71820967(-) A-I      intronic chr16:71813423(-) A-I      intronic chr16:71770627(-) A-I      intronic chr16:71813408(-) A-I      intronic chr16:71834454(-) A-I      intronic chr16:71832307(-) A-I      intronic chr16:71812335(-) A-I      intronic chr16:71807734(-) A-I      intronic chr16:71818626(-) A-I      intronic chr16:71793108(-) A-I      intronic chr16:71784507(-) A-I      intronic chr16:71777629(-) A-I      intronic chr16:71827751(-) A-I      intronic chr16:71784383(-) A-I      intronic chr16:71789611(-) A-I      intronic chr16:71841166(-) A-I      intronic chr16:71818743(-) A-I      intronic chr16:71770617(-) A-I      intronic chr16:71838802(-) A-I      intronic chr16:71827819(-) A-I      intronic chr16:71832283(-) A-I      intronic chr16:71794550(-) A-I      intronic chr16:71814858(-) A-I      intronic chr16:71836334(-) A-I      intronic chr16:71814687(-) A-I      intronic chr16:71794189(-) A-I      intronic chr16:71769947(-) A-I      intronic chr16:71838103(-) A-I      intronic chr16:71836961(-) A-I      intronic chr16:71824399(-) A-I      intronic chr16:71793105(-) A-I      intronic chr16:71778656(-) A-I      intronic chr16:71835591(-) A-I      intronic chr16:71793288(-) A-I      intronic chr16:71784870(-) A-I      intronic chr16:71784565(-) A-I      intronic chr16:71784497(-) A-I      intronic chr16:71794646(-) A-I      intronic chr16:71834511(-) A-I      intronic chr16:71818491(-) A-I      intronic chr16:71807737(-) A-I      intronic chr16:71814717(-) A-I      intronic chr16:71832375(-) A-I      intronic chr16:71794289(-) A-I      intronic chr16:71788703(-) A-I      intronic chr16:71836896(-) A-I      intronic chr16:71813982(-) A-I      intronic chr16:71821302(-) A-I      intronic chr16:71794716(-) A-I      intronic chr16:71784816(-) A-I      intronic chr16:71793554(-) A-I      intronic chr16:71784347(-) A-I      intronic chr16:71836901(-) A-I      intronic chr16:71777978(-) A-I      intronic chr16:71832312(-) A-I      intronic chr16:71834418(-) A-I      intronic chr16:71832628(-) A-I      intronic chr16:71819617(-) A-I      intronic chr16:71793419(-) A-I      intronic chr16:71836524(-) A-I      intronic chr16:71832374(-) A-I      intronic chr16:71777941(-) A-I      intronic chr16:71837742(-) A-I      intronic chr16:71825757(-) A-I      intronic chr16:71838088(-) A-I      intronic chr16:71837018(-) A-I      intronic chr16:71799135(-) A-I      intronic chr16:71819442(-) A-I      intronic chr16:71784523(-) A-I      intronic chr16:71814051(-) A-I      intronic chr16:71838133(-) A-I      intronic chr16:71829919(-) A-I      intronic chr16:71767528(-) A-I      intronic chr16:71807892(-) A-I      intronic chr16:71839251(-) A-I      intronic chr16:71820802(-) A-I      intronic chr16:71838046(-) A-I      intronic chr16:71838123(-) A-I      intronic chr16:71826990(-) A-I      intronic chr16:71799131(-) A-I      intronic chr16:71838118(-) A-I      intronic chr16:71813340(-) A-I      intronic chr16:71785056(-) A-I      intronic chr16:71799154(-) A-I      intronic chr16:71781262(-) A-I      intronic chr16:71836716(-) A-I      intronic chr16:71778607(-) A-I      intronic chr16:71784386(-) A-I      intronic chr16:71778145(-) A-I      intronic chr16:71825506(-) A-I      intronic chr16:71784933(-) A-I      intronic chr16:71832230(-) A-I      intronic chr16:71820826(-) A-I      intronic chr16:71838119(-) A-I      intronic chr16:71836873(-) A-I      intronic chr16:71789591(-) A-I      intronic chr16:71793420(-) A-I      intronic chr16:71795686(-) A-I      intronic chr16:71785020(-) A-I      intronic chr16:71836272(-) A-I      intronic chr16:71818635(-) A-I      intronic chr16:71794647(-) A-I      intronic chr16:71809111(-) A-I      intronic chr16:71836285(-) A-I      intronic chr16:71816237(-) A-I      intronic chr16:71829974(-) A-I      intronic chr16:71784501(-) A-I      intronic chr16:71818495(-) A-I      intronic chr16:71778566(-) A-I      intronic chr16:71813439(-) A-I      intronic chr16:71821139(-) A-I      intronic chr16:71832691(-) A-I      intronic chr16:71775386(-) A-I      intronic chr16:71783612(-) A-I      intronic chr16:71784423(-) A-I      intronic chr16:71820546(-) A-I      intronic chr16:71782921(-) A-I      intronic chr16:71777624(-) A-I      intronic chr16:71825536(-) A-I      intronic chr16:71777357(-) A-I      intronic chr16:71838467(-) A-I      intronic chr16:71789258(-) A-I      intronic chr16:71776872(-) A-I      intronic chr16:71832599(-) A-I      intronic chr16:71827728(-) A-I      intronic chr16:71769482(-) A-I      intronic chr16:71778035(-) A-I      intronic chr16:71778661(-) A-I      intronic chr16:71778617(-) A-I      intronic chr16:71825793(-) A-I      intronic chr16:71776656(-) A-I      intronic chr16:71794052(-) A-I      intronic chr16:71793474(-) A-I      intronic chr16:71785012(-) A-I      intronic chr16:71794572(-) A-I      intronic chr16:71793421(-) A-I      intronic chr16:71814677(-) A-I      intronic chr16:71794717(-) A-I      intronic chr16:71794586(-) A-I      intronic chr16:71818514(-) A-I      intronic chr16:71775484(-) A-I      intronic chr16:71812504(-) A-I      intronic chr16:71838121(-) A-I      intronic chr16:71777310(-) A-I      intronic chr16:71812464(-) A-I      intronic chr16:71778575(-) A-I      intronic chr16:71777891(-) A-I      intronic chr16:71785130(-) A-I      intronic chr16:71814146(-) A-I      intronic chr16:71778752(-) A-I      intronic chr16:71814996(-) A-I      intronic chr16:71837706(-) A-I      intronic chr16:71777903(-) A-I      intronic chr16:71819595(-) A-I      intronic chr16:71769951(-) A-I      intronic chr16:71780051(-) A-I      intronic chr16:71770610(-) A-I      intronic chr16:71839239(-) A-I      intronic chr16:71778568(-) A-I      intronic chr16:71770594(-) A-I      intronic chr16:71785152(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	AP1G1	chr16:71776655(-) A-I intron -    15258596 chr16:71776656(-) A-I intron -    15258596 chr16:71777310(-) A-I intron -    15258596 chr16:71777406(-) A-I intron -    15258596 chr16:71777423(-) A-I intron -    15258596 chr16:71777498(-) A-I intron -    15258596 chr16:71825761(-) A-I intron -    15342557 chr16:71825793(-) A-I intron -    15342557 chr16:71826990(-) A-I intron -    15342557 chr16:71827018(-) A-I intron -    15342557 chr16:71784933(-) A-I intron -    21960545 chr16:71776872(-) A-G intron -    22484847 chr16:71778607(-) A-G intron -    22484847 chr16:71778617(-) A-G intron -    22484847 chr16:71778619(-) A-G intron -    22484847 chr16:71784591(-) A-G intron -    22484847 chr16:71825506(-) A-G intron -    22484847 chr16:71837057(-) A-G intron -    22484847 chr16:71837065(-) A-G intron -    22484847 chr16:71838088(-) A-G intron -    22484847 chr16:71838117(-) A-G intron -    22484847 chr16:71838118(-) A-G intron -    22484847 chr16:71838119(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AP1G1	chr16:71763400-71763401(-) m6A 3'UTR       24209618//24981863 chr16:71763450-71763451(-) m6A 3'UTR       24209618//24981863 chr16:71763457-71763458(-) m6A 3'UTR       24209618//24981863//22608085 chr16:71763520-71763521(-) m6A 3'UTR       24209618//24981863//22608085 chr16:71763566-71763567(-) m6A 3'UTR       24209618//24981863//22608085 chr16:71763670-71763671(-) m6A 3'UTR       24209618//24981863 chr16:71765975-71765976(-) m6A 3'UTR       26404942 chr16:71766021-71766022(-) m6A 3'UTR       26404942 chr16:71766216-71766217(-) m6A 3'UTR       24284625//27773535//22608085 chr16:71766286-71766287(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr16:71766293-71766294(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr16:71766314-71766315(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr16:71766323-71766324(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr16:71766351-71766352(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr16:71766450-71766451(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//26404942//27773535//22608085 chr16:71766544-71766545(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr16:71766605-71766606(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr16:71766626-71766627(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr16:71766789-71766790(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr16:71766843-71766844(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr16:71766915-71766916(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr16:71766988-71766989(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr16:71768521-71768522(-) m6A CDS       24284625//27773535//22608085 chr16:71768549-71768550(-) m6A CDS       24284625//27773535 chr16:71772872-71772873(-) m6A 3'UTR//CDS       26404942//27773535 chr16:71787588-71787589(-) m6A exon//intron       27773535 chr16:71811600-71811601(-) m1A intron       26863196 chr16:71823052-71823053(-) Am intron       - chr16:71823257-71823258(-) m6A CDS//exon       27371828 chr16:71823327-71823328(-) m6A CDS//exon       27371828 chr16:71823336-71823337(-) m6A CDS//exon       27371828 chr16:71823345-71823346(-) m6A CDS//exon       27371828 chr16:71840613-71840614(-) m6A 5'UTR//exon//intron       27371828 chr16:71840620-71840621(-) m6A 5'UTR//exon//intron       27371828 chr16:71840628-71840629(-) m6A 5'UTR//exon//intron       27371828 chr16:71842803-71842804(-) m6A 5'UTR//exon//intron       24981863 chr16:71842847-71842848(-) m6A 5'UTR//exon       24284625//24981863 chr16:71842872-71842873(-) m6A 5'UTR//exon       24284625//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-8-3p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	AP1G1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|HeLa-S3 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-8-3p
Interactor2: AP1G1

Evidence Support:

Weak-Evidence	PAR-CLIP
Prediction-Evidence	PARalyzer
Support Database	ViRBase//VIRmiRNA

References:

PMID	22100165	Target region	3'UTR
Source	ViRBase//VIRmiRNA	Interactor1 expression	None
Tissue or cell line	BC-1 cells//BC-3 cells//BJAB cells	Interactor2 expression	None
Description	Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites.Clusters with seed matches to expressed miRNAs were considered candidate target sites. Of the clusters mapping to human 3'UTRs, 69% (BC-1) and 70% (BC-3) had seed matches to expressed miRNAs (Tables S6).Table S6A BC-1 derived 3'UTR clusters with seed matches to expressed miRNAs.