Basic Information:

  VIRBase ID:  

VHID00445422

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-9-3p:  MIMAT0002185          SLC24A2:  NM_001193288     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-9-3p	SLC24A2
miRBase Accession/Entrez ID	MIMAT0002185	25769
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	NCKX2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC24A2	chr9:19557915(-) A-I      intronic chr9:19557946(-) A-I      intronic chr9:19561147(-) A-I      intronic chr9:19548546(-) A-I      intronic chr9:19548539(-) A-I      intronic chr9:19548534(-) A-I      intronic chr9:19548532(-) A-I      intronic chr9:19548531(-) A-I      intronic chr9:19548506(-) A-I      intronic chr9:19760455(-) A-I      intronic chr9:19760454(-) A-I      intronic chr9:19760426(-) A-I      intronic chr9:19760425(-) A-I      intronic chr9:19760421(-) A-I      intronic chr9:19523059(-) A-I      intronic chr9:19561056(-) A-I      intronic chr9:19561061(-) A-I      intronic chr9:19557933(-) A-I      intronic chr9:19562873(-) A-I      intronic chr9:19564016(-) A-I      intronic chr9:19561662(-) A-I      intronic chr9:19563068(-) A-I      intronic chr9:19523097(-) A-I      intronic chr9:19555880(-) A-I      intronic chr9:19562899(-) A-I      intronic chr9:19558087(-) A-I      intronic chr9:19523142(-) A-I      intronic chr9:19523112(-) A-I      intronic chr9:19508525(-) A-I      3'UTR chr9:19665652(-) A-I      intronic chr9:19780640(-) A-I      intronic chr9:19563009(-) A-I      intronic chr9:19612429(-) A-I      intronic chr9:19780809(-) A-I      intronic chr9:19557998(-) A-I      intronic chr9:19612844(-) A-I      intronic chr9:19612377(-) A-I      intronic chr9:19780789(-) A-I      intronic chr9:19780351(-) A-I      intronic chr9:19780649(-) A-I      intronic chr9:19779801(-) A-I      intronic chr9:19522123(-) A-I      intronic chr9:19572175(-) A-I      intronic chr9:19612450(-) A-I      intronic chr9:19562933(-) A-I      intronic chr9:19780824(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC24A2	chr9:19512352-19512353(-) m6A 3'UTR       25456834 chr9:19512438-19512439(-) m6A 3'UTR       25456834 chr9:19512477-19512478(-) m6A 3'UTR       25456834 chr9:19514184-19514185(-) m6A 3'UTR       25456834 chr9:19514252-19514253(-) m6A 3'UTR       25456834 chr9:19514264-19514265(-) m6A 3'UTR       25456834 chr9:19515847-19515848(-) m6A 3'UTR       24981863//22575960 chr9:19515853-19515854(-) m6A 3'UTR       24981863//22575960 chr9:19515927-19515928(-) m6A 3'UTR       25456834//24981863//22575960 chr9:19515936-19515937(-) m6A 3'UTR       25456834//24981863//22575960 chr9:19786300-19786301(-) m6A CDS       25456834//22575960 chr9:19786363-19786364(-) m6A CDS       25456834//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC24A2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-9-3p
Interactor2: SLC24A2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg