Basic Information:

  VIRBase ID:  

VHID00444617

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-9-3p:  MIMAT0002185          RND3:  NM_005168     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-9-3p	RND3
miRBase Accession/Entrez ID	MIMAT0002185	390
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ARHE//memB//Rho8//RhoE

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RND3	chr2:151325477-151325478(-) m6A 3'UTR       24981863//22608085 chr2:151325504-151325505(-) m6A 3'UTR       24981863//22608085 chr2:151325945-151325946(-) m6A 3'UTR       24981863//26404942//27773535//22608085 chr2:151325970-151325971(-) m6A 3'UTR       24981863//26404942//27773535//22608085 chr2:151326058-151326059(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085 chr2:151326327-151326328(-) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr2:151326444-151326445(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr2:151326454-151326455(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr2:151326476-151326477(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr2:151326528-151326529(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr2:151326540-151326541(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr2:151326560-151326561(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr2:151326566-151326567(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr2:151326612-151326613(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr2:151326634-151326635(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr2:151326672-151326673(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr2:151326734-151326735(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr2:151341889-151341890(-) m6A 5'UTR//intron       27773535 chr2:151343215-151343216(-) m6A CDS//exon       27773535 chr2:151343794-151343795(-) m6A CDS       24981863 chr2:151343822-151343823(-) m6A CDS       24981863 chr2:151343839-151343840(-) m6A CDS       24981863 chr2:151344128-151344129(-) m6A 5'UTR//intron       25456834//24981863 chr2:151344161-151344162(-) m6A 5'UTR//intron       25456834//24981863 chr2:151344185-151344186(-) m6A 5'UTR//intron       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RND3	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-9-3p
Interactor2: RND3

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg