Basic Information:

  VIRBase ID:  

VHID00444607

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-9-3p:  MIMAT0002185          ALOX15B:  NM_001039131     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-9-3p	ALOX15B
miRBase Accession/Entrez ID	MIMAT0002185	247
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	15-LOX-2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ALOX15B	chr17:7942458-7942459(+) m6A 5'UTR//exon       - chr17:7951848-7951849(+) m6A CDS//exon       - chr17:7951866-7951867(+) m6A CDS//exon       - chr17:7951894-7951895(+) m6A 3'UTR//exon       - chr17:7951959-7951960(+) m6A 3'UTR//exon       25456834 chr17:7951973-7951974(+) m6A 3'UTR//exon       25456834 chr17:7951999-7952000(+) m6A 3'UTR//exon       25456834 chr17:7952007-7952008(+) m6A 3'UTR//exon       25456834 chr17:7952047-7952048(+) m6A 3'UTR//exon       25456834 chr17:7952053-7952054(+) m6A 3'UTR//exon       25456834 chr17:7952064-7952065(+) m6A 3'UTR//exon       - chr17:7952091-7952092(+) m6A 3'UTR//exon       - chr17:7952104-7952105(+) m6A 3'UTR//exon       - chr17:7952109-7952110(+) m6A 3'UTR//exon       - chr17:7952256-7952257(+) m6A 3'UTR//exon       - chr17:7952280-7952281(+) m6A 3'UTR//exon       - chr17:7952309-7952310(+) m6A 3'UTR//exon       25456834 chr17:7952414-7952415(+) m6A 3'UTR//exon       - chr17:7952447-7952448(+) m6A 3'UTR//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ALOX15B	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-9-3p
Interactor2: ALOX15B

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg