Basic Information:

  VIRBase ID:  

VHID00444586

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-9-3p:  MIMAT0002185          IRF1-AS1:  NR_161242     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-9-3p	IRF1-AS1
miRBase Accession/Entrez ID	MIMAT0002185	441108
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	lncRNA
Alias	-	C5orf56

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	IRF1-AS1	chr5:131768483(+) A-I      intronic chr5:131779242(+) A-I      intronic chr5:131757954(+) A-I      intronic chr5:131757961(+) A-I      intronic chr5:131758127(+) A-I      intronic chr5:131758086(+) A-I      intronic chr5:131779328(+) A-I      intronic chr5:131757647(+) A-I      intronic chr5:131751370(+) A-I      intronic chr5:131757677(+) A-I      intronic chr5:131757667(+) A-I      intronic chr5:131757569(+) A-I      intronic chr5:131758047(+) A-I      intronic chr5:131757703(+) A-I      intronic chr5:131758110(+) A-I      intronic chr5:131757709(+) A-I      intronic chr5:131757949(+) A-I      intronic chr5:131768404(+) A-I      intronic chr5:131776102(+) A-I      intronic chr5:131808401(+) A-I      intronic chr5:131808299(+) A-I      intronic chr5:131808305(+) A-I      intronic chr5:131757570(+) A-I      intronic chr5:131758104(+) A-I      intronic chr5:131758177(+) A-I      intronic chr5:131758130(+) A-I      intronic chr5:131758192(+) A-I      intronic chr5:131758034(+) A-I      intronic chr5:131758072(+) A-I      intronic chr5:131776089(+) A-I      intronic chr5:131808388(+) A-I      intronic chr5:131758056(+) A-I      intronic chr5:131808375(+) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	IRF1-AS1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-9-3p
Interactor2: IRF1-AS1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg