Basic Information:

  VIRBase ID:  

VHID00443365

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-9-5p:  MIMAT0002184          MFSD5:  NM_001170790     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-9-5p	MFSD5
miRBase Accession/Entrez ID	MIMAT0002184	84975
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	hsMOT2//SLC61A1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MFSD5	chr12:53645114-53645115(+) m6A exon       24981863 chr12:53645496-53645497(+) m6A 5'UTR//exon       22608085 chr12:53645547-53645548(+) m6A CDS//exon       - chr12:53645556-53645557(+) m6A CDS//exon       - chr12:53645960-53645961(+) m6A 5'UTR//intron       24284625//25456834//24981863 chr12:53646039-53646040(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863 chr12:53646678-53646679(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr12:53646699-53646700(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr12:53646749-53646750(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:53646813-53646814(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:53646984-53646985(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:53646995-53646996(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22608085 chr12:53647151-53647152(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr12:53647280-53647281(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr12:53647292-53647293(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr12:53647321-53647322(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr12:53647355-53647356(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:53647429-53647430(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr12:53647442-53647443(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr12:53647732-53647733(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22608085 chr12:53647825-53647826(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:53647893-53647894(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:53647984-53647985(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr12:53647998-53647999(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr12:53648101-53648102(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr12:53648119-53648120(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr12:53648173-53648174(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MFSD5	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-9-5p
Interactor2: MFSD5

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg