Basic Information:

  VIRBase ID:  

VHID00443111

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-9-5p:  MIMAT0002184          MYCT1:  NM_025107     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-9-5p	MYCT1
miRBase Accession/Entrez ID	MIMAT0002184	80177
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MTLC

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MYCT1	chr6:153026380(+) A-I      intronic chr6:153027821(+) A-I      intronic chr6:153027771(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MYCT1	chr6:153043046-153043047(+) m6A CDS//intron       24981863 chr6:153043132-153043133(+) m6A CDS//intron       24981863 chr6:153043217-153043218(+) m6A CDS//intron       - chr6:153043459-153043460(+) m6A 3'UTR//intron       - chr6:153043508-153043509(+) m6A 3'UTR//intron       - chr6:153043527-153043528(+) m6A 3'UTR//intron       - chr6:153043542-153043543(+) m6A 3'UTR//intron       - chr6:153043557-153043558(+) m6A 3'UTR//intron       - chr6:153043893-153043894(+) m6A 3'UTR//intron       - chr6:153043943-153043944(+) m6A 3'UTR       24209618//24981863 chr6:153044009-153044010(+) m6A 3'UTR       24209618//24981863 chr6:153044098-153044099(+) m6A 3'UTR       24209618//24981863 chr6:153044106-153044107(+) m6A 3'UTR       24209618//24981863 chr6:153044202-153044203(+) m6A 3'UTR       24209618//24981863 chr6:153044209-153044210(+) m6A 3'UTR       24209618//24981863 chr6:153044252-153044253(+) m6A 3'UTR       24209618//24981863 chr6:153044267-153044268(+) m6A 3'UTR       24209618//24981863 chr6:153044272-153044273(+) m6A 3'UTR       24209618//24981863 chr6:153044322-153044323(+) m6A 3'UTR       24209618//24981863 chr6:153044476-153044477(+) m6A 3'UTR       - chr6:153044494-153044495(+) m6A 3'UTR       - chr6:153044537-153044538(+) m6A 3'UTR       - chr6:153044597-153044598(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MYCT1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-9-5p
Interactor2: MYCT1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg