Basic Information:

  VIRBase ID:  

VHID00442463

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-9-5p:  MIMAT0002184          PRMT6:  NM_018137     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-9-5p	PRMT6
miRBase Accession/Entrez ID	MIMAT0002184	55170
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HRMT1L6

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PRMT6	chr1:107599918(+) C-T intron -    21725310

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PRMT6	chr1:107599397-107599398(+) m6A CDS       24284625//24209618//25456834//24981863//27773536//22575960//22608085 chr1:107599451-107599452(+) m6A CDS       24284625//24209618//25456834//24981863//27773536//22575960//22608085 chr1:107599467-107599468(+) m6A CDS       24284625//24209618//25456834//24981863//27773536//22575960//22608085 chr1:107599524-107599525(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107599566-107599567(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107599728-107599729(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107599750-107599751(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107599755-107599756(+) Y CDS       26075521 chr1:107599760-107599761(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107599777-107599778(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107599816-107599817(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107599859-107599860(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107599989-107599990(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107600245-107600246(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107600293-107600294(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107600337-107600338(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107600379-107600380(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107600424-107600425(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107600438-107600439(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107600445-107600446(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107600460-107600461(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:107600781-107600782(+) m6A 3'UTR       24284625 chr1:107600879-107600880(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PRMT6	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-9-5p
Interactor2: PRMT6

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg