Basic Information:

  VIRBase ID:  

VHID00439452

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.6002

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-2-5p:  MIMAT0002183          SENP5:  NM_001308045     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-2-5p	SENP5
miRBase Accession/Entrez ID	MIMAT0002183	205564
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SENP5	chr3:196632056(+) A-I      ncRNA chr3:196637321(+) A-I      intronic chr3:196637318(+) A-I      intronic chr3:196637317(+) A-I      intronic chr3:196637304(+) A-I      intronic chr3:196637269(+) A-I      intronic chr3:196646151(+) A-I      intronic chr3:196646145(+) A-I      intronic chr3:196646142(+) A-I      intronic chr3:196646132(+) A-I      intronic chr3:196646120(+) A-I      intronic chr3:196646105(+) A-I      intronic chr3:196646097(+) A-I      intronic chr3:196646096(+) A-I      intronic chr3:196643917(+) A-I      intronic chr3:196643852(+) A-I      intronic chr3:196643849(+) A-I      intronic chr3:196643847(+) A-I      intronic chr3:196643846(+) A-I      intronic chr3:196643843(+) A-I      intronic chr3:196643834(+) A-I      intronic chr3:196643766(+) A-I      intronic chr3:196640352(+) A-I      intronic chr3:196640347(+) A-I      intronic chr3:196640330(+) A-I      intronic chr3:196640290(+) A-I      intronic chr3:196640286(+) A-I      intronic chr3:196640263(+) A-I      intronic chr3:196640240(+) A-I      intronic chr3:196638625(+) A-I      intronic chr3:196637261(+) A-I      intronic chr3:196638378(+) A-I      intronic chr3:196597863(+) A-I      intronic chr3:196653274(+) A-I      intronic chr3:196653590(+) A-I      intronic chr3:196653649(+) A-I      intronic chr3:196653667(+) A-I      intronic chr3:196653690(+) A-I      intronic chr3:196643035(+) A-I      intronic chr3:196643018(+) A-I      intronic chr3:196643017(+) A-I      intronic chr3:196653206(+) A-I      intronic chr3:196634073(+) A-I      intronic chr3:196634116(+) A-I      intronic chr3:196634159(+) A-I      intronic chr3:196634165(+) A-I      intronic chr3:196634167(+) A-I      intronic chr3:196634172(+) A-I      intronic chr3:196596446(+) A-I      intronic chr3:196634943(+) A-I      intronic chr3:196635096(+) A-I      intronic chr3:196597416(+) A-I      intronic chr3:196597514(+) A-I      intronic chr3:196643010(+) A-I      intronic chr3:196597563(+) A-I      intronic chr3:196597880(+) A-I      intronic chr3:196597883(+) A-I      intronic chr3:196643051(+) A-I      intronic chr3:196643083(+) A-I      intronic chr3:196643091(+) A-I      intronic chr3:196643421(+) A-I      intronic chr3:196643485(+) A-I      intronic chr3:196653214(+) A-I      intronic chr3:196643503(+) A-I      intronic chr3:196643564(+) A-I      intronic chr3:196643565(+) A-I      intronic chr3:196640650(+) A-I      intronic chr3:196643598(+) A-I      intronic chr3:196596214(+) A-I      intronic chr3:196596442(+) A-I      intronic chr3:196596445(+) A-I      intronic chr3:196643618(+) A-I      intronic chr3:196643620(+) A-I      intronic chr3:196642941(+) A-I      intronic chr3:196640722(+) A-I      intronic chr3:196640646(+) A-I      intronic chr3:196640638(+) A-I      intronic chr3:196640600(+) A-I      intronic chr3:196640395(+) A-I      intronic chr3:196640361(+) A-I      intronic chr3:196640252(+) A-I      intronic chr3:196639670(+) A-I      intronic chr3:196638570(+) A-I      intronic chr3:196653265(+) A-I      intronic chr3:196653224(+) A-I      intronic chr3:196600457(+) A-I      intronic chr3:196645014(+) A-I      intronic chr3:196637402(+) A-I      intronic chr3:196637399(+) A-I      intronic chr3:196644926(+) A-I      intronic chr3:196597894(+) A-I      intronic chr3:196637237(+) A-I      intronic chr3:196597902(+) A-I      intronic chr3:196600545(+) A-I      intronic chr3:196600554(+) A-I      intronic chr3:196600596(+) A-I      intronic chr3:196602611(+) A-I      intronic chr3:196602654(+) A-I      intronic chr3:196603659(+) A-I      intronic chr3:196607898(+) A-I      intronic chr3:196614169(+) A-I      intronic chr3:196614703(+) A-I      intronic chr3:196614704(+) A-I      intronic chr3:196614720(+) A-I      intronic chr3:196614786(+) A-I      intronic chr3:196615360(+) A-I      intronic chr3:196615467(+) A-I      intronic chr3:196618779(+) A-I      intronic chr3:196618860(+) A-I      intronic chr3:196618868(+) A-I      intronic chr3:196621160(+) A-I      intronic chr3:196621168(+) A-I      intronic chr3:196621214(+) A-I      intronic chr3:196621223(+) A-I      intronic chr3:196622472(+) A-I      intronic chr3:196622492(+) A-I      intronic chr3:196622559(+) A-I      intronic chr3:196623443(+) A-I      intronic chr3:196632889(+) A-I      intronic chr3:196597921(+) A-I      intronic chr3:196597926(+) A-I      intronic chr3:196600456(+) A-I      intronic chr3:196645063(+) A-I      intronic chr3:196646192(+) A-I      intronic chr3:196646196(+) A-I      intronic chr3:196646205(+) A-I      intronic chr3:196632933(+) A-I      intronic chr3:196633011(+) A-I      intronic chr3:196646455(+) A-I      intronic chr3:196646503(+) A-I      intronic chr3:196646504(+) A-I      intronic chr3:196646585(+) A-I      intronic chr3:196646643(+) A-I      intronic chr3:196646676(+) A-I      intronic chr3:196649445(+) A-I      intronic chr3:196649446(+) A-I      intronic chr3:196649531(+) A-I      intronic chr3:196649683(+) A-I      intronic chr3:196637322(+) A-I      intronic chr3:196649762(+) A-I      intronic chr3:196653108(+) A-I      intronic chr3:196653143(+) A-I      intronic chr3:196653157(+) A-I      intronic chr3:196653175(+) A-I      intronic chr3:196597515(+) A-I      intronic chr3:196631954(+) A-I      ncRNA chr3:196631888(+) A-I      ncRNA chr3:196646190(+) A-I      intronic chr3:196634994(+) A-I      intronic chr3:196640255(+) A-I      intronic chr3:196597787(+) A-I      intronic chr3:196625783(+) A-I      intronic chr3:196649372(+) A-I      intronic chr3:196643601(+) A-I      intronic chr3:196653697(+) A-I      intronic chr3:196645057(+) A-I      intronic chr3:196632926(+) A-I      intronic chr3:196643827(+) A-I      intronic chr3:196610743(+) A-I      intronic chr3:196655963(+) A-I      intronic chr3:196635066(+) A-I      intronic chr3:196631403(+) A-I      intronic chr3:196643119(+) A-I      intronic chr3:196632941(+) A-I      intronic chr3:196649437(+) A-I      intronic chr3:196643525(+) A-I      intronic chr3:196615376(+) A-I      intronic chr3:196653242(+) A-I      intronic chr3:196645020(+) A-I      intronic chr3:196640443(+) A-I      intronic chr3:196597961(+) A-I      intronic chr3:196615252(+) A-I      intronic chr3:196615343(+) A-I      intronic chr3:196643884(+) A-I      intronic chr3:196640584(+) A-I      intronic chr3:196596103(+) A-I      intronic chr3:196596310(+) A-I      intronic chr3:196632960(+) A-I      intronic chr3:196596168(+) A-I      intronic chr3:196654403(+) A-I      intronic chr3:196631540(+) A-I      intronic chr3:196646074(+) A-I      intronic chr3:196646409(+) A-I      intronic chr3:196653232(+) A-I      intronic chr3:196637347(+) A-I      intronic chr3:196640237(+) A-I      intronic chr3:196631481(+) A-I      intronic chr3:196643449(+) A-I      intronic chr3:196596551(+) A-I      intronic chr3:196635609(+) A-I      intronic chr3:196649516(+) A-I      intronic chr3:196644961(+) A-I      intronic chr3:196632980(+) A-I      intronic chr3:196640686(+) A-I      intronic chr3:196643581(+) A-I      intronic chr3:196618762(+) A-I      intronic chr3:196602701(+) A-I      intronic chr3:196615410(+) A-I      intronic chr3:196632851(+) A-I      intronic chr3:196615334(+) A-I      intronic chr3:196632938(+) A-I      intronic chr3:196643731(+) A-I      intronic chr3:196643954(+) A-I      intronic chr3:196640278(+) A-I      intronic chr3:196631549(+) A-I      intronic chr3:196655789(+) A-I      intronic chr3:196660707(+) A-I      3'UTR chr3:196641375(+) A-I      intronic chr3:196653144(+) A-I      intronic chr3:196638668(+) A-I      intronic chr3:196646191(+) A-I      intronic chr3:196610746(+) A-I      intronic chr3:196646150(+) A-I      intronic chr3:196631512(+) A-I      intronic chr3:196649813(+) A-I      intronic chr3:196641367(+) A-I      intronic chr3:196653614(+) A-I      intronic chr3:196634238(+) A-I      intronic chr3:196621277(+) A-I      intronic chr3:196634987(+) A-I      intronic chr3:196623465(+) A-I      intronic chr3:196646187(+) A-I      intronic chr3:196640320(+) A-I      intronic chr3:196646544(+) A-I      intronic chr3:196600111(+) A-I      intronic chr3:196631409(+) A-I      intronic chr3:196640294(+) A-I      intronic chr3:196643658(+) A-I      intronic chr3:196632862(+) A-I      intronic chr3:196632890(+) A-I      intronic chr3:196631580(+) A-I      intronic chr3:196637335(+) A-I      intronic chr3:196602730(+) A-I      intronic chr3:196649632(+) A-I      intronic chr3:196643885(+) A-I      intronic chr3:196634140(+) A-I      intronic chr3:196634095(+) A-I      intronic chr3:196622505(+) A-I      intronic chr3:196649566(+) A-I      intronic chr3:196640647(+) A-I      intronic chr3:196640720(+) A-I      intronic chr3:196632970(+) A-I      intronic chr3:196632836(+) A-I      intronic chr3:196621134(+) A-I      intronic chr3:196640701(+) A-I      intronic chr3:196653610(+) A-I      intronic chr3:196619063(+) A-I      intronic chr3:196597969(+) A-I      intronic chr3:196596095(+) A-I      intronic chr3:196640660(+) A-I      intronic chr3:196643950(+) A-I      intronic chr3:196615311(+) A-I      intronic chr3:196653341(+) A-I      intronic chr3:196643468(+) A-I      intronic chr3:196643795(+) A-I      intronic chr3:196649622(+) A-I      intronic chr3:196643117(+) A-I      intronic chr3:196643463(+) A-I      intronic chr3:196643578(+) A-I      intronic chr3:196637424(+) A-I      intronic chr3:196633012(+) A-I      intronic chr3:196641377(+) A-I      intronic chr3:196635509(+) A-I      intronic chr3:196634910(+) A-I      intronic chr3:196638561(+) A-I      intronic chr3:196646410(+) A-I      intronic chr3:196597836(+) A-I      intronic chr3:196600810(+) A-I      intronic chr3:196634252(+) A-I      intronic chr3:196649623(+) A-I      intronic chr3:196643940(+) A-I      intronic chr3:196654378(+) A-I      intronic chr3:196638669(+) A-I      intronic chr3:196640253(+) A-I      intronic chr3:196605592(+) A-I      intronic chr3:196632935(+) A-I      intronic chr3:196618761(+) A-I      intronic chr3:196649807(+) A-I      intronic chr3:196653609(+) A-I      intronic chr3:196632976(+) A-I      intronic chr3:196643908(+) A-I      intronic chr3:196621099(+) A-I      intronic chr3:196653565(+) A-I      intronic chr3:196597447(+) A-I      intronic chr3:196618382(+) A-I      intronic chr3:196597528(+) A-I      intronic chr3:196597986(+) A-I      intronic chr3:196640229(+) A-I      intronic chr3:196596192(+) A-I      intronic chr3:196653541(+) A-I      intronic chr3:196640430(+) A-I      intronic chr3:196653091(+) A-I      intronic chr3:196640257(+) A-I      intronic chr3:196643858(+) A-I      intronic chr3:196597918(+) A-I      intronic chr3:196654402(+) A-I      intronic chr3:196600938(+) A-I      intronic chr3:196643648(+) A-I      intronic chr3:196631488(+) A-I      intronic chr3:196643819(+) A-I      intronic chr3:196603249(+) A-I      intronic chr3:196654396(+) A-I      intronic chr3:196632944(+) A-I      intronic chr3:196653696(+) A-I      intronic chr3:196615899(+) A-I      intronic chr3:196597531(+) A-I      intronic chr3:196640460(+) A-I      intronic chr3:196618381(+) A-I      intronic chr3:196638593(+) A-I      intronic chr3:196632841(+) A-I      intronic chr3:196645000(+) A-I      intronic chr3:196643498(+) A-I      intronic chr3:196640291(+) A-I      intronic chr3:196634961(+) A-I      intronic chr3:196631524(+) A-I      intronic chr3:196641361(+) A-I      intronic chr3:196614739(+) A-I      intronic chr3:196640359(+) A-I      intronic chr3:196597651(+) A-I      intronic chr3:196643148(+) A-I      intronic chr3:196653340(+) A-I      intronic chr3:196643826(+) A-I      intronic chr3:196643914(+) A-I      intronic chr3:196643937(+) A-I      intronic chr3:196631501(+) A-I      intronic chr3:196632835(+) A-I      intronic chr3:196638512(+) A-I      intronic chr3:196640279(+) A-I      intronic chr3:196597554(+) A-I      intronic chr3:196654432(+) A-I      intronic chr3:196622486(+) A-I      intronic chr3:196640360(+) A-I      intronic chr3:196631851(+) A-I      ncRNA chr3:196632027(+) A-I      ncRNA chr3:196631952(+) A-I      ncRNA chr3:196631910(+) A-I      ncRNA chr3:196632049(+) A-I      ncRNA chr3:196631900(+) A-I      ncRNA chr3:196631923(+) A-I      ncRNA chr3:196631870(+) A-I      ncRNA chr3:196631971(+) A-I      ncRNA chr3:196631871(+) A-I      ncRNA chr3:196631968(+) A-I      ncRNA chr3:196631936(+) A-I      ncRNA chr3:196631980(+) A-I      ncRNA chr3:196631956(+) A-I      ncRNA chr3:196631945(+) A-I      ncRNA

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SENP5	chr3:196632944(+) A-I intron -    22327324 chr3:196634198(+) A-I intron -    22327324 chr3:196638503(+) A-I intron -    22327324 chr3:196640294(+) A-I intron -    22327324 chr3:196640320(+) A-I intron -    22327324 chr3:196643772(+) A-I intron -    22327324 chr3:196643908(+) A-I intron -    22327324 chr3:196631900(+) A-I intron -    21960545 chr3:196634073(+) A-I intron -    21960545 chr3:196596168(+) A-G intron -    22484847 chr3:196596192(+) A-G intron -    22484847 chr3:196596551(+) A-G intron -    22484847 chr3:196596552(+) A-G intron -    22484847 chr3:196597447(+) A-G intron -    22484847 chr3:196597518(+) A-G intron -    22484847 chr3:196597528(+) A-G intron -    22484847 chr3:196597531(+) A-G intron -    22484847 chr3:196597651(+) A-G intron -    22484847 chr3:196597787(+) A-G intron -    22484847 chr3:196597836(+) A-G intron -    22484847 chr3:196597881(+) A-G intron -    22484847 chr3:196597918(+) A-G intron -    22484847 chr3:196597934(+) G-A intron -    22484847 chr3:196597986(+) A-G intron -    22484847 chr3:196602701(+) A-G intron -    22484847 chr3:196605592(+) A-G intron -    22484847 chr3:196607509(+) C-T intron -    22484847 chr3:196614739(+) A-G intron -    22484847 chr3:196614742(+) A-G intron -    22484847 chr3:196615311(+) A-G intron -    22484847 chr3:196615347(+) A-G intron -    22484847 chr3:196618395(+) A-G intron -    22484847 chr3:196618761(+) A-G intron -    22484847 chr3:196618762(+) A-G intron -    22484847 chr3:196620616(+) A-G intron -    22484847 chr3:196621177(+) A-G intron -    22484847 chr3:196621183(+) A-G intron -    22484847 chr3:196631409(+) A-G intron -    22484847 chr3:196631549(+) A-G intron -    22484847 chr3:196631581(+) A-G intron -    22484847 chr3:196631583(+) A-C intron -    22484847 chr3:196631870(+) A-G intron -    22484847 chr3:196631871(+) A-G intron -    22484847 chr3:196631900(+) A-G intron -    22484847 chr3:196631910(+) A-G intron -    22484847 chr3:196631937(+) A-G intron -    22484847 chr3:196631952(+) A-G intron -    22484847 chr3:196631954(+) A-G intron -    22484847 chr3:196631956(+) A-G intron -    22484847 chr3:196631968(+) A-G intron -    22484847 chr3:196631971(+) A-G intron -    22484847 chr3:196631980(+) A-G intron -    22484847 chr3:196632027(+) A-G intron -    22484847 chr3:196632051(+) A-G intron -    22484847 chr3:196632835(+) A-G intron -    22484847 chr3:196632836(+) A-G intron -    22484847 chr3:196632841(+) A-G intron -    22484847 chr3:196632881(+) A-G intron -    22484847 chr3:196632890(+) A-G intron -    22484847 chr3:196632926(+) A-G intron -    22484847 chr3:196632935(+) A-G intron -    22484847 chr3:196632938(+) A-G intron -    22484847 chr3:196632939(+) A-G intron -    22484847 chr3:196632941(+) A-G intron -    22484847 chr3:196632944(+) A-G intron -    22484847 chr3:196632960(+) A-G intron -    22484847 chr3:196632970(+) A-G intron -    22484847 chr3:196632976(+) A-G intron -    22484847 chr3:196632980(+) A-G intron -    22484847 chr3:196632993(+) A-G intron -    22484847 chr3:196633012(+) A-G intron -    22484847 chr3:196634071(+) A-G intron -    22484847 chr3:196634095(+) A-G intron -    22484847 chr3:196634157(+) A-G intron -    22484847 chr3:196634198(+) A-G intron -    22484847 chr3:196634224(+) A-G intron -    22484847 chr3:196634252(+) A-G intron -    22484847 chr3:196635509(+) A-G intron -    22484847 chr3:196635609(+) A-G intron -    22484847 chr3:196637347(+) A-G intron -    22484847 chr3:196637424(+) A-G intron -    22484847 chr3:196638503(+) A-G intron -    22484847 chr3:196638560(+) A-G intron -    22484847 chr3:196638561(+) A-G intron -    22484847 chr3:196638668(+) A-G intron -    22484847 chr3:196640237(+) A-G intron -    22484847 chr3:196640255(+) A-G intron -    22484847 chr3:196640257(+) A-G intron -    22484847 chr3:196640294(+) A-G intron -    22484847 chr3:196640320(+) A-G intron -    22484847 chr3:196640321(+) A-G intron -    22484847 chr3:196640326(+) A-G intron -    22484847 chr3:196640359(+) A-G intron -    22484847 chr3:196640360(+) A-G intron -    22484847 chr3:196640584(+) A-G intron -    22484847 chr3:196640585(+) A-G intron -    22484847 chr3:196640601(+) A-G intron -    22484847 chr3:196640620(+) A-G intron -    22484847 chr3:196640621(+) A-G intron -    22484847 chr3:196640647(+) A-G intron -    22484847 chr3:196640660(+) A-G intron -    22484847 chr3:196640686(+) A-G intron -    22484847 chr3:196640720(+) A-G intron -    22484847 chr3:196640772(+) A-G intron -    22484847 chr3:196640800(+) A-G intron -    22484847 chr3:196643077(+) A-G intron -    22484847 chr3:196643078(+) A-G intron -    22484847 chr3:196643117(+) A-G intron -    22484847 chr3:196643119(+) A-G intron -    22484847 chr3:196643124(+) A-G intron -    22484847 chr3:196643148(+) A-G intron -    22484847 chr3:196643463(+) A-G intron -    22484847 chr3:196643468(+) A-G intron -    22484847 chr3:196643473(+) A-G intron -    22484847 chr3:196643498(+) A-G intron -    22484847 chr3:196643516(+) A-G intron -    22484847 chr3:196643538(+) A-G intron -    22484847 chr3:196643581(+) A-G intron -    22484847 chr3:196643587(+) A-G intron -    22484847 chr3:196643595(+) A-G intron -    22484847 chr3:196643601(+) A-G intron -    22484847 chr3:196643648(+) A-G intron -    22484847 chr3:196643652(+) T-C intron -    22484847 chr3:196643795(+) A-G intron -    22484847 chr3:196643804(+) A-G intron -    22484847 chr3:196643819(+) A-G intron -    22484847 chr3:196643826(+) A-G intron -    22484847 chr3:196643858(+) A-G intron -    22484847 chr3:196643884(+) A-G intron -    22484847 chr3:196643885(+) A-G intron -    22484847 chr3:196643908(+) A-G intron -    22484847 chr3:196643937(+) A-G intron -    22484847 chr3:196643954(+) A-G intron -    22484847 chr3:196644961(+) A-G intron -    22484847 chr3:196646150(+) A-G intron -    22484847 chr3:196646187(+) A-G intron -    22484847 chr3:196646190(+) A-G intron -    22484847 chr3:196646191(+) A-G intron -    22484847 chr3:196646253(+) C-G intron -    22484847 chr3:196646574(+) A-G intron -    22484847 chr3:196646579(+) A-G intron -    22484847 chr3:196649516(+) A-G intron -    22484847 chr3:196649566(+) A-G intron -    22484847 chr3:196653177(+) A-G intron -    22484847 chr3:196653189(+) T-C intron -    22484847 chr3:196653253(+) T-C intron -    22484847 chr3:196653316(+) A-G intron -    22484847 chr3:196653340(+) A-G intron -    22484847 chr3:196653610(+) A-G intron -    22484847 chr3:196653696(+) A-G intron -    22484847 chr3:196653776(+) A-G intron -    22484847 chr3:196654387(+) G-A intron -    22484847 chr3:196654402(+) A-G intron -    22484847 chr3:196655789(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SENP5	chr3:196594821-196594822(+) m6A 5'UTR       24981863 chr3:196612060-196612061(+) m6A CDS//intron       22608085 chr3:196612207-196612208(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22575960//22608085 chr3:196612216-196612217(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22575960//22608085 chr3:196612273-196612274(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22575960//22608085 chr3:196612289-196612290(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22575960//22608085 chr3:196612357-196612358(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr3:196612379-196612380(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chr3:196612390-196612391(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chr3:196612519-196612520(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chr3:196612526-196612527(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chr3:196612614-196612615(+) m6A CDS//intron       24284625//24981863//22575960//22608085 chr3:196612681-196612682(+) m6A CDS//intron       24981863//22608085 chr3:196612808-196612809(+) m6A CDS//intron       24284625//24209618//22608085 chr3:196612872-196612873(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chr3:196612883-196612884(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr3:196612936-196612937(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr3:196612944-196612945(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr3:196612983-196612984(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr3:196613010-196613011(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:196613121-196613122(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr3:196613188-196613189(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:196613219-196613220(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:196613258-196613259(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:196613287-196613288(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:196613364-196613365(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr3:196613372-196613373(+) Cm CDS//intron       - chr3:196613427-196613428(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22608085 chr3:196613476-196613477(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22608085 chr3:196613482-196613483(+) m6A CDS//intron       24209618//25456834//24981863//22608085 chr3:196613511-196613512(+) m6A CDS//intron       24209618//25456834//24981863//22608085 chr3:196613542-196613543(+) m6A CDS//intron       24209618//25456834//24981863//22608085 chr3:196657732-196657733(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr3:196657789-196657790(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:196657795-196657796(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:196657806-196657807(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:196657860-196657861(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:196658121-196658122(+) m6A 3'UTR//intron       24981863 chr3:196658137-196658138(+) m6A 3'UTR//intron       24981863 chr3:196658168-196658169(+) m6A 3'UTR//intron       24981863 chr3:196661445-196661446(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SENP5	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Insoluble cytoplasm K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-2-5p
Interactor2: SENP5

Evidence Support:

Weak-Evidence	PAR-CLIP
Prediction-Evidence	miRanda//PARalyzer//Targetscan
Support Database	ViRBase//VIRmiRNA//VmiReg

References:

PMID	22100165	Target region	3'UTR
Source	ViRBase//VIRmiRNA//VmiReg	Interactor1 expression	None
Tissue or cell line	BC-1 cells//BC-3 cells//BJAB cells	Interactor2 expression	None
Description	Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites.Clusters with seed matches to expressed miRNAs were considered candidate target sites. Of the clusters mapping to human 3'UTRs, 69% (BC-1) and 70% (BC-3) had seed matches to expressed miRNAs (Tables S6).Table S6A BC-1 derived 3'UTR clusters with seed matches to expressed miRNAs.