Basic Information:

  VIRBase ID:  

VHID00438464

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.6055

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-2-5p:  MIMAT0002183          CSNK1G1:  NM_001329605     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-2-5p	CSNK1G1
miRBase Accession/Entrez ID	MIMAT0002183	53944
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CK1gamma1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CSNK1G1	chr15:64478530(-) A-I      intronic chr15:64478544(-) A-I      intronic chr15:64486789(-) A-I      intronic chr15:64486813(-) A-I      intronic chr15:64629789(-) A-I      intronic chr15:64629760(-) A-I      intronic chr15:64474387(-) A-I      intronic chr15:64629742(-) A-I      intronic chr15:64629737(-) A-I      intronic chr15:64629733(-) A-I      intronic chr15:64629732(-) A-I      intronic chr15:64531713(-) A-I      intronic chr15:64486848(-) A-I      intronic chr15:64531707(-) A-I      intronic chr15:64511718(-) A-I      intronic chr15:64511720(-) A-I      intronic chr15:64511726(-) A-I      intronic chr15:64522218(-) A-I      intronic chr15:64523381(-) A-I      intronic chr15:64512111(-) A-I      intronic chr15:64523378(-) A-I      intronic chr15:64512121(-) A-I      intronic chr15:64522253(-) A-I      intronic chr15:64522236(-) A-I      intronic chr15:64522232(-) A-I      intronic chr15:64478525(-) A-I      intronic chr15:64477919(-) A-I      intronic chr15:64474409(-) A-I      intronic chr15:64521035(-) A-I      intronic chr15:64483469(-) A-I      intronic chr15:64474391(-) A-I      intronic chr15:64474374(-) A-I      intronic chr15:64474359(-) A-I      intronic chr15:64522226(-) A-I      intronic chr15:64474400(-) A-I      intronic chr15:64531643(-) A-I      intronic chr15:64479618(-) A-I      intronic chr15:64522612(-) A-I      intronic chr15:64644917(-) A-I      intronic chr15:64618421(-) A-I      intronic chr15:64614831(-) A-I      intronic chr15:64532381(-) A-I      intronic chr15:64512152(-) A-I      intronic chr15:64492712(-) A-I      intronic chr15:64479292(-) A-I      intronic chr15:64603383(-) A-I      intronic chr15:64517964(-) A-I      intronic chr15:64485446(-) A-I      intronic chr15:64485580(-) A-I      intronic chr15:64485606(-) A-I      intronic chr15:64629651(-) A-I      intronic chr15:64602058(-) A-I      intronic chr15:64486777(-) A-I      intronic chr15:64486821(-) A-I      intronic chr15:64570378(-) A-I      intronic chr15:64475972(-) A-I      intronic chr15:64486844(-) A-I      intronic chr15:64475987(-) A-I      intronic chr15:64593882(-) A-I      intronic chr15:64476011(-) A-I      intronic chr15:64476298(-) A-I      intronic chr15:64486854(-) A-I      intronic chr15:64501183(-) A-I      intronic chr15:64522700(-) A-I      intronic chr15:64476338(-) A-I      intronic chr15:64486862(-) A-I      intronic chr15:64486872(-) A-I      intronic chr15:64522258(-) A-I      intronic chr15:64476390(-) A-I      intronic chr15:64486880(-) A-I      intronic chr15:64486890(-) A-I      intronic chr15:64644262(-) A-I      intronic chr15:64476659(-) A-I      intronic chr15:64483399(-) A-I      intronic chr15:64486892(-) A-I      intronic chr15:64486893(-) A-I      intronic chr15:64476790(-) A-I      intronic chr15:64486919(-) A-I      intronic chr15:64486827(-) A-I      intronic chr15:64488169(-) A-I      intronic chr15:64563267(-) A-I      intronic chr15:64609972(-) A-I      intronic chr15:64488207(-) A-I      intronic chr15:64488257(-) A-I      intronic chr15:64476793(-) A-I      intronic chr15:64488261(-) A-I      intronic chr15:64488267(-) A-I      intronic chr15:64476813(-) A-I      intronic chr15:64488307(-) A-I      intronic chr15:64477860(-) A-I      intronic chr15:64478849(-) A-I      intronic chr15:64488416(-) A-I      intronic chr15:64488839(-) A-I      intronic chr15:64492435(-) A-I      intronic chr15:64488844(-) A-I      intronic chr15:64488845(-) A-I      intronic chr15:64488923(-) A-I      intronic chr15:64488924(-) A-I      intronic chr15:64490516(-) A-I      intronic chr15:64574596(-) A-I      intronic chr15:64490542(-) A-I      intronic chr15:64490569(-) A-I      intronic chr15:64490574(-) A-I      intronic chr15:64490578(-) A-I      intronic chr15:64491224(-) A-I      intronic chr15:64491322(-) A-I      intronic chr15:64612152(-) A-I      intronic chr15:64491338(-) A-I      intronic chr15:64491393(-) A-I      intronic chr15:64491414(-) A-I      intronic chr15:64477871(-) A-I      intronic chr15:64493388(-) A-I      intronic chr15:64491797(-) A-I      intronic chr15:64491809(-) A-I      intronic chr15:64491940(-) A-I      intronic chr15:64492227(-) A-I      intronic chr15:64492232(-) A-I      intronic chr15:64492264(-) A-I      intronic chr15:64492287(-) A-I      intronic chr15:64492295(-) A-I      intronic chr15:64492296(-) A-I      intronic chr15:64492320(-) A-I      intronic chr15:64492332(-) A-I      intronic chr15:64492641(-) A-I      intronic chr15:64492720(-) A-I      intronic chr15:64477880(-) A-I      intronic chr15:64492724(-) A-I      intronic chr15:64492746(-) A-I      intronic chr15:64493362(-) A-I      intronic chr15:64595409(-) A-I      intronic chr15:64493449(-) A-I      intronic chr15:64493465(-) A-I      intronic chr15:64531850(-) A-I      intronic chr15:64494867(-) A-I      intronic chr15:64494890(-) A-I      intronic chr15:64494892(-) A-I      intronic chr15:64573350(-) A-I      intronic chr15:64494956(-) A-I      intronic chr15:64574601(-) A-I      intronic chr15:64594371(-) A-I      intronic chr15:64494998(-) A-I      intronic chr15:64500540(-) A-I      intronic chr15:64477906(-) A-I      intronic chr15:64644712(-) A-I      intronic chr15:64505065(-) A-I      intronic chr15:64505122(-) A-I      intronic chr15:64505142(-) A-I      intronic chr15:64506975(-) A-I      intronic chr15:64507479(-) A-I      intronic chr15:64611829(-) A-I      intronic chr15:64477923(-) A-I      intronic chr15:64644386(-) A-I      intronic chr15:64507662(-) A-I      intronic chr15:64508213(-) A-I      intronic chr15:64508341(-) A-I      intronic chr15:64618471(-) A-I      intronic chr15:64509756(-) A-I      intronic chr15:64477951(-) A-I      intronic chr15:64488276(-) A-I      intronic chr15:64488333(-) A-I      intronic chr15:64603382(-) A-I      intronic chr15:64509793(-) A-I      intronic chr15:64509903(-) A-I      intronic chr15:64510660(-) A-I      intronic chr15:64510729(-) A-I      intronic chr15:64510784(-) A-I      intronic chr15:64511191(-) A-I      intronic chr15:64511227(-) A-I      intronic chr15:64511272(-) A-I      intronic chr15:64511734(-) A-I      intronic chr15:64478059(-) A-I      intronic chr15:64511750(-) A-I      intronic chr15:64511769(-) A-I      intronic chr15:64512030(-) A-I      intronic chr15:64512069(-) A-I      intronic chr15:64512137(-) A-I      intronic chr15:64512140(-) A-I      intronic chr15:64512161(-) A-I      intronic chr15:64512229(-) A-I      intronic chr15:64512250(-) A-I      intronic chr15:64517928(-) A-I      intronic chr15:64518044(-) A-I      intronic chr15:64518045(-) A-I      intronic chr15:64518502(-) A-I      intronic chr15:64518655(-) A-I      intronic chr15:64518686(-) A-I      intronic chr15:64518719(-) A-I      intronic chr15:64518745(-) A-I      intronic chr15:64522188(-) A-I      intronic chr15:64522193(-) A-I      intronic chr15:64522197(-) A-I      intronic chr15:64522217(-) A-I      intronic chr15:64522244(-) A-I      intronic chr15:64522317(-) A-I      intronic chr15:64522372(-) A-I      intronic chr15:64522565(-) A-I      intronic chr15:64522581(-) A-I      intronic chr15:64523457(-) A-I      intronic chr15:64523487(-) A-I      intronic chr15:64531663(-) A-I      intronic chr15:64531686(-) A-I      intronic chr15:64531766(-) A-I      intronic chr15:64531773(-) A-I      intronic chr15:64531874(-) A-I      intronic chr15:64532309(-) A-I      intronic chr15:64486809(-) A-I      intronic chr15:64509931(-) A-I      intronic chr15:64541016(-) A-I      intronic chr15:64542775(-) A-I      intronic chr15:64542832(-) A-I      intronic chr15:64542939(-) A-I      intronic chr15:64546688(-) A-I      intronic chr15:64546689(-) A-I      intronic chr15:64546721(-) A-I      intronic chr15:64546724(-) A-I      intronic chr15:64546739(-) A-I      intronic chr15:64547372(-) A-I      intronic chr15:64547373(-) A-I      intronic chr15:64549810(-) A-I      intronic chr15:64645144(-) A-I      intronic chr15:64511119(-) A-I      intronic chr15:64618428(-) A-I      intronic chr15:64518633(-) A-I      intronic chr15:64549813(-) A-I      intronic chr15:64550449(-) A-I      intronic chr15:64553962(-) A-I      intronic chr15:64554102(-) A-I      intronic chr15:64561723(-) A-I      intronic chr15:64561753(-) A-I      intronic chr15:64569461(-) A-I      intronic chr15:64570422(-) A-I      intronic chr15:64572760(-) A-I      intronic chr15:64572779(-) A-I      intronic chr15:64573845(-) A-I      intronic chr15:64573956(-) A-I      intronic chr15:64574188(-) A-I      intronic chr15:64574281(-) A-I      intronic chr15:64485465(-) A-I      intronic chr15:64583069(-) A-I      intronic chr15:64583073(-) A-I      intronic chr15:64583140(-) A-I      intronic chr15:64583159(-) A-I      intronic chr15:64478539(-) A-I      intronic chr15:64584325(-) A-I      intronic chr15:64584930(-) A-I      intronic chr15:64584942(-) A-I      intronic chr15:64584949(-) A-I      intronic chr15:64586393(-) A-I      intronic chr15:64644847(-) A-I      intronic chr15:64586404(-) A-I      intronic chr15:64586409(-) A-I      intronic chr15:64586410(-) A-I      intronic chr15:64523473(-) A-I      intronic chr15:64586930(-) A-I      intronic chr15:64586944(-) A-I      intronic chr15:64531723(-) A-I      intronic chr15:64479535(-) A-I      intronic chr15:64478954(-) A-I      intronic chr15:64509963(-) A-I      intronic chr15:64479130(-) A-I      intronic chr15:64523329(-) A-I      intronic chr15:64645193(-) A-I      intronic chr15:64479150(-) A-I      intronic chr15:64586967(-) A-I      intronic chr15:64479162(-) A-I      intronic chr15:64508414(-) A-I      intronic chr15:64587003(-) A-I      intronic chr15:64479262(-) A-I      intronic chr15:64587205(-) A-I      intronic chr15:64587209(-) A-I      intronic chr15:64632935(-) A-I      intronic chr15:64588496(-) A-I      intronic chr15:64479287(-) A-I      intronic chr15:64588497(-) A-I      intronic chr15:64588513(-) A-I      intronic chr15:64479476(-) A-I      intronic chr15:64588514(-) A-I      intronic chr15:64588515(-) A-I      intronic chr15:64481153(-) A-I      intronic chr15:64588516(-) A-I      intronic chr15:64588532(-) A-I      intronic chr15:64588819(-) A-I      intronic chr15:64471368(-) A-I      intronic chr15:64588884(-) A-I      intronic chr15:64588896(-) A-I      intronic chr15:64588951(-) A-I      intronic chr15:64588963(-) A-I      intronic chr15:64589056(-) A-I      intronic chr15:64591012(-) A-I      intronic chr15:64591114(-) A-I      intronic chr15:64481159(-) A-I      intronic chr15:64522747(-) A-I      intronic chr15:64591132(-) A-I      intronic chr15:64591623(-) A-I      intronic chr15:64591669(-) A-I      intronic chr15:64591683(-) A-I      intronic chr15:64593931(-) A-I      intronic chr15:64593964(-) A-I      intronic chr15:64594010(-) A-I      intronic chr15:64594427(-) A-I      intronic chr15:64594450(-) A-I      intronic chr15:64645770(-) A-I      intronic chr15:64594463(-) A-I      intronic chr15:64588901(-) A-I      intronic chr15:64594531(-) A-I      intronic chr15:64644837(-) A-I      intronic chr15:64573917(-) A-I      intronic chr15:64594532(-) A-I      intronic chr15:64542931(-) A-I      intronic chr15:64481187(-) A-I      intronic chr15:64599668(-) A-I      intronic chr15:64589000(-) A-I      intronic chr15:64599678(-) A-I      intronic chr15:64599687(-) A-I      intronic chr15:64599695(-) A-I      intronic chr15:64612219(-) A-I      intronic chr15:64492361(-) A-I      intronic chr15:64572629(-) A-I      intronic chr15:64599741(-) A-I      intronic chr15:64600046(-) A-I      intronic chr15:64488211(-) A-I      intronic chr15:64600157(-) A-I      intronic chr15:64600158(-) A-I      intronic chr15:64600852(-) A-I      intronic chr15:64600906(-) A-I      intronic chr15:64602064(-) A-I      intronic chr15:64481256(-) A-I      intronic chr15:64602065(-) A-I      intronic chr15:64602109(-) A-I      intronic chr15:64602204(-) A-I      intronic chr15:64602658(-) A-I      intronic chr15:64602821(-) A-I      intronic chr15:64602833(-) A-I      intronic chr15:64602870(-) A-I      intronic chr15:64602878(-) A-I      intronic chr15:64482142(-) A-I      intronic chr15:64486802(-) A-I      intronic chr15:64542697(-) A-I      intronic chr15:64511255(-) A-I      intronic chr15:64638781(-) A-I      intronic chr15:64492647(-) A-I      intronic chr15:64501129(-) A-I      intronic chr15:64574678(-) A-I      intronic chr15:64603019(-) A-I      intronic chr15:64603024(-) A-I      intronic chr15:64518564(-) A-I      intronic chr15:64522324(-) A-I      intronic chr15:64603038(-) A-I      intronic chr15:64603121(-) A-I      intronic chr15:64603122(-) A-I      intronic chr15:64518672(-) A-I      intronic chr15:64603157(-) A-I      intronic chr15:64604032(-) A-I      intronic chr15:64483291(-) A-I      intronic chr15:64608268(-) A-I      intronic chr15:64608623(-) A-I      intronic chr15:64631006(-) A-I      intronic chr15:64491223(-) A-I      intronic chr15:64638408(-) A-I      intronic chr15:64483393(-) A-I      intronic chr15:64494854(-) A-I      intronic chr15:64609384(-) A-I      intronic chr15:64512507(-) A-I      intronic chr15:64483531(-) A-I      intronic chr15:64483532(-) A-I      intronic chr15:64563611(-) A-I      intronic chr15:64523004(-) A-I      intronic chr15:64609402(-) A-I      intronic chr15:64512513(-) A-I      intronic chr15:64611868(-) A-I      intronic chr15:64512589(-) A-I      intronic chr15:64522375(-) A-I      intronic chr15:64511257(-) A-I      intronic chr15:64517293(-) A-I      intronic chr15:64486918(-) A-I      intronic chr15:64512531(-) A-I      intronic chr15:64484866(-) A-I      intronic chr15:64512418(-) A-I      intronic chr15:64611872(-) A-I      intronic chr15:64630839(-) A-I      intronic chr15:64611875(-) A-I      intronic chr15:64512405(-) A-I      intronic chr15:64611881(-) A-I      intronic chr15:64613689(-) A-I      intronic chr15:64618660(-) A-I      intronic chr15:64618686(-) A-I      intronic chr15:64583186(-) A-I      intronic chr15:64618719(-) A-I      intronic chr15:64618756(-) A-I      intronic chr15:64512526(-) A-I      intronic chr15:64522199(-) A-I      intronic chr15:64628709(-) A-I      intronic chr15:64512649(-) A-I      intronic chr15:64512442(-) A-I      intronic chr15:64512390(-) A-I      intronic chr15:64512550(-) A-I      intronic chr15:64511218(-) A-I      intronic chr15:64628765(-) A-I      intronic chr15:64512512(-) A-I      intronic chr15:64512650(-) A-I      intronic chr15:64628773(-) A-I      intronic chr15:64631051(-) A-I      intronic chr15:64512370(-) A-I      intronic chr15:64631107(-) A-I      intronic chr15:64512431(-) A-I      intronic chr15:64476313(-) A-I      intronic chr15:64631133(-) A-I      intronic chr15:64512432(-) A-I      intronic chr15:64512385(-) A-I      intronic chr15:64646260(-) A-I      intronic chr15:64632981(-) A-I      intronic chr15:64633056(-) A-I      intronic chr15:64512488(-) A-I      intronic chr15:64635299(-) A-I      intronic chr15:64512422(-) A-I      intronic chr15:64635301(-) A-I      intronic chr15:64638768(-) A-I      intronic chr15:64638794(-) A-I      intronic chr15:64638821(-) A-I      intronic chr15:64638908(-) A-I      intronic chr15:64643930(-) A-I      intronic chr15:64511236(-) A-I      intronic chr15:64604065(-) A-I      intronic chr15:64643938(-) A-I      intronic chr15:64644066(-) A-I      intronic chr15:64644382(-) A-I      intronic chr15:64644741(-) A-I      intronic chr15:64479248(-) A-I      intronic chr15:64633734(-) A-I      intronic chr15:64544617(-) A-I      intronic chr15:64644777(-) A-I      intronic chr15:64644798(-) A-I      intronic chr15:64484886(-) A-I      intronic chr15:64644939(-) A-I      intronic chr15:64645202(-) A-I      intronic chr15:64645620(-) A-I      intronic chr15:64645763(-) A-I      intronic chr15:64531667(-) A-I      intronic chr15:64645764(-) A-I      intronic chr15:64574327(-) A-I      intronic chr15:64644809(-) A-I      intronic chr15:64638346(-) A-I      intronic chr15:64484895(-) A-I      intronic chr15:64511281(-) A-I      intronic chr15:64583050(-) A-I      intronic chr15:64494923(-) A-I      intronic chr15:64484990(-) A-I      intronic chr15:64609412(-) A-I      intronic chr15:64484995(-) A-I      intronic chr15:64484996(-) A-I      intronic chr15:64518673(-) A-I      intronic chr15:64484998(-) A-I      intronic chr15:64488766(-) A-I      intronic chr15:64485434(-) A-I      intronic chr15:64491273(-) A-I      intronic chr15:64511091(-) A-I      intronic chr15:64488212(-) A-I      intronic chr15:64477939(-) A-I      intronic chr15:64618586(-) A-I      intronic chr15:64461658(-) A-I      3'UTR chr15:64493385(-) A-I      intronic chr15:64542861(-) A-I      intronic chr15:64638860(-) A-I      intronic chr15:64631588(-) A-I      intronic chr15:64612351(-) A-I      intronic chr15:64644894(-) A-I      intronic chr15:64644755(-) A-I      intronic chr15:64522982(-) A-I      intronic chr15:64492642(-) A-I      intronic chr15:64618363(-) A-I      intronic chr15:64645166(-) A-I      intronic chr15:64611943(-) A-I      intronic chr15:64644822(-) A-I      intronic chr15:64522381(-) A-I      intronic chr15:64478531(-) A-I      intronic chr15:64476155(-) A-I      intronic chr15:64479559(-) A-I      intronic chr15:64490502(-) A-I      intronic chr15:64517318(-) A-I      intronic chr15:64511126(-) A-I      intronic chr15:64614626(-) A-I      intronic chr15:64517963(-) A-I      intronic chr15:64491368(-) A-I      intronic chr15:64501188(-) A-I      intronic chr15:64636017(-) A-I      intronic chr15:64572724(-) A-I      intronic chr15:64633048(-) A-I      intronic chr15:64478869(-) A-I      intronic chr15:64638347(-) A-I      intronic chr15:64614448(-) A-I      intronic chr15:64522594(-) A-I      intronic chr15:64558246(-) A-I      intronic chr15:64635271(-) A-I      intronic chr15:64523440(-) A-I      intronic chr15:64645947(-) A-I      intronic chr15:64545449(-) A-I      intronic chr15:64532260(-) A-I      intronic chr15:64573915(-) A-I      intronic chr15:64512110(-) A-I      intronic chr15:64518115(-) A-I      intronic chr15:64517996(-) A-I      intronic chr15:64614822(-) A-I      intronic chr15:64587067(-) A-I      intronic chr15:64492247(-) A-I      intronic chr15:64478020(-) A-I      intronic chr15:64569580(-) A-I      intronic chr15:64488226(-) A-I      intronic chr15:64518635(-) A-I      intronic chr15:64618420(-) A-I      intronic chr15:64488316(-) A-I      intronic chr15:64615836(-) A-I      intronic chr15:64589032(-) A-I      intronic chr15:64490432(-) A-I      intronic chr15:64488788(-) A-I      intronic chr15:64586436(-) A-I      intronic chr15:64550372(-) A-I      intronic chr15:64612228(-) A-I      intronic chr15:64482185(-) A-I      intronic chr15:64594045(-) A-I      intronic chr15:64635970(-) A-I      intronic chr15:64613719(-) A-I      intronic chr15:64478450(-) A-I      intronic chr15:64492209(-) A-I      intronic chr15:64644717(-) A-I      intronic chr15:64481213(-) A-I      intronic chr15:64491238(-) A-I      intronic chr15:64607112(-) A-I      intronic chr15:64644871(-) A-I      intronic chr15:64523049(-) A-I      intronic chr15:64561844(-) A-I      intronic chr15:64575977(-) A-I      intronic chr15:64478404(-) A-I      intronic chr15:64486853(-) A-I      intronic chr15:64573993(-) A-I      intronic chr15:64644339(-) A-I      intronic chr15:64510346(-) A-I      intronic chr15:64522679(-) A-I      intronic chr15:64520687(-) A-I      intronic chr15:64523359(-) A-I      intronic chr15:64572667(-) A-I      intronic chr15:64484910(-) A-I      intronic chr15:64532346(-) A-I      intronic chr15:64495016(-) A-I      intronic chr15:64633873(-) A-I      intronic chr15:64635618(-) A-I      intronic chr15:64542868(-) A-I      intronic chr15:64509932(-) A-I      intronic chr15:64508348(-) A-I      intronic chr15:64603424(-) A-I      intronic chr15:64555552(-) A-I      intronic chr15:64644821(-) A-I      intronic chr15:64494926(-) A-I      intronic chr15:64631094(-) A-I      intronic chr15:64523395(-) A-I      intronic chr15:64494966(-) A-I      intronic chr15:64643956(-) A-I      intronic chr15:64508393(-) A-I      intronic chr15:64587187(-) A-I      intronic chr15:64644876(-) A-I      intronic chr15:64522666(-) A-I      intronic chr15:64491965(-) A-I      intronic chr15:64549982(-) A-I      intronic chr15:64618398(-) A-I      intronic chr15:64618498(-) A-I      intronic chr15:64488334(-) A-I      intronic chr15:64488194(-) A-I      intronic chr15:64494971(-) A-I      intronic chr15:64518565(-) A-I      intronic chr15:64644782(-) A-I      intronic chr15:64471362(-) A-I      intronic chr15:64608572(-) A-I      intronic chr15:64601397(-) A-I      intronic chr15:64518025(-) A-I      intronic chr15:64488888(-) A-I      intronic chr15:64474544(-) A-I      intronic chr15:64602117(-) A-I      intronic chr15:64479085(-) A-I      intronic chr15:64488385(-) A-I      intronic chr15:64641183(-) A-I      intronic chr15:64510298(-) A-I      intronic chr15:64602671(-) A-I      intronic chr15:64614910(-) A-I      intronic chr15:64522178(-) A-I      intronic chr15:64583185(-) A-I      intronic chr15:64532333(-) A-I      intronic chr15:64481268(-) A-I      intronic chr15:64522636(-) A-I      intronic chr15:64488364(-) A-I      intronic chr15:64609425(-) A-I      intronic chr15:64635372(-) A-I      intronic chr15:64531703(-) A-I      intronic chr15:64593884(-) A-I      intronic chr15:64615412(-) A-I      intronic chr15:64607110(-) A-I      intronic chr15:64488304(-) A-I      intronic chr15:64614674(-) A-I      intronic chr15:64518609(-) A-I      intronic chr15:64490678(-) A-I      intronic chr15:64518591(-) A-I      intronic chr15:64603438(-) A-I      intronic chr15:64523061(-) A-I      intronic chr15:64491808(-) A-I      intronic chr15:64506937(-) A-I      intronic chr15:64569407(-) A-I      intronic chr15:64602697(-) A-I      intronic chr15:64488172(-) A-I      intronic chr15:64508179(-) A-I      intronic chr15:64477998(-) A-I      intronic chr15:64591045(-) A-I      intronic chr15:64492561(-) A-I      intronic chr15:64490510(-) A-I      intronic chr15:64531824(-) A-I      intronic chr15:64512467(-) A-I      intronic chr15:64643996(-) A-I      intronic chr15:64594341(-) A-I      intronic chr15:64563274(-) A-I      intronic chr15:64479681(-) A-I      intronic chr15:64523309(-) A-I      intronic chr15:64492322(-) A-I      intronic chr15:64538770(-) A-I      intronic chr15:64563236(-) A-I      intronic chr15:64563357(-) A-I      intronic chr15:64544608(-) A-I      intronic chr15:64508167(-) A-I      intronic chr15:64614657(-) A-I      intronic chr15:64588417(-) A-I      intronic chr15:64558400(-) A-I      intronic chr15:64644817(-) A-I      intronic chr15:64644881(-) A-I      intronic chr15:64613611(-) A-I      intronic chr15:64522990(-) A-I      intronic chr15:64494928(-) A-I      intronic chr15:64479655(-) A-I      intronic chr15:64490632(-) A-I      intronic chr15:64522716(-) A-I      intronic chr15:64588458(-) A-I      intronic chr15:64608569(-) A-I      intronic chr15:64588527(-) A-I      intronic chr15:64631037(-) A-I      intronic chr15:64603517(-) A-I      intronic chr15:64610961(-) A-I      intronic chr15:64478338(-) A-I      intronic chr15:64477935(-) A-I      intronic chr15:64492281(-) A-I      intronic chr15:64562140(-) A-I      intronic chr15:64506966(-) A-I      intronic chr15:64488418(-) A-I      intronic chr15:64618504(-) A-I      intronic chr15:64618791(-) A-I      intronic chr15:64509814(-) A-I      intronic chr15:64483538(-) A-I      intronic chr15:64501201(-) A-I      intronic chr15:64531851(-) A-I      intronic chr15:64575820(-) A-I      intronic chr15:64512569(-) A-I      intronic chr15:64588813(-) A-I      intronic chr15:64597770(-) A-I      intronic chr15:64644841(-) A-I      intronic chr15:64615405(-) A-I      intronic chr15:64615276(-) A-I      intronic chr15:64614796(-) A-I      intronic chr15:64522680(-) A-I      intronic chr15:64488330(-) A-I      intronic chr15:64511691(-) A-I      intronic chr15:64492651(-) A-I      intronic chr15:64584208(-) A-I      intronic chr15:64643915(-) A-I      intronic chr15:64478444(-) A-I      intronic chr15:64549818(-) A-I      intronic chr15:64618327(-) A-I      intronic chr15:64572071(-) A-I      intronic chr15:64645920(-) A-I      intronic chr15:64644702(-) A-I      intronic chr15:64608543(-) A-I      intronic chr15:64573939(-) A-I      intronic chr15:64550373(-) A-I      intronic chr15:64602698(-) A-I      intronic chr15:64588435(-) A-I      intronic chr15:64612161(-) A-I      intronic chr15:64481242(-) A-I      intronic chr15:64638396(-) A-I      intronic chr15:64488294(-) A-I      intronic chr15:64492417(-) A-I      intronic chr15:64587186(-) A-I      intronic chr15:64611968(-) A-I      intronic chr15:64481142(-) A-I      intronic chr15:64646485(-) A-I      intronic chr15:64482156(-) A-I      intronic chr15:64512476(-) A-I      intronic chr15:64644783(-) A-I      intronic chr15:64588539(-) A-I      intronic chr15:64522602(-) A-I      intronic chr15:64572825(-) A-I      intronic chr15:64588398(-) A-I      intronic chr15:64477999(-) A-I      intronic chr15:64476832(-) A-I      intronic chr15:64491403(-) A-I      intronic chr15:64614675(-) A-I      intronic chr15:64588980(-) A-I      intronic chr15:64511233(-) A-I      intronic chr15:64586400(-) A-I      intronic chr15:64518568(-) A-I      intronic chr15:64541210(-) A-I      intronic chr15:64572666(-) A-I      intronic chr15:64594072(-) A-I      intronic chr15:64588388(-) A-I      intronic chr15:64587241(-) A-I      intronic chr15:64584287(-) A-I      intronic chr15:64549862(-) A-I      intronic chr15:64522285(-) A-I      intronic chr15:64523269(-) A-I      intronic chr15:64561896(-) A-I      intronic chr15:64522750(-) A-I      intronic chr15:64477941(-) A-I      intronic chr15:64492362(-) A-I      intronic chr15:64613603(-) A-I      intronic chr15:64638929(-) A-I      intronic chr15:64583117(-) A-I      intronic chr15:64479119(-) A-I      intronic chr15:64486969(-) A-I      intronic chr15:64517401(-) A-I      intronic chr15:64522316(-) A-I      intronic chr15:64494849(-) A-I      intronic chr15:64584873(-) A-I      intronic chr15:64630777(-) A-I      intronic chr15:64531786(-) A-I      intronic chr15:64492544(-) A-I      intronic chr15:64630759(-) A-I      intronic chr15:64638836(-) A-I      intronic chr15:64608309(-) A-I      intronic chr15:64531777(-) A-I      intronic chr15:64506934(-) A-I      intronic chr15:64490684(-) A-I      intronic chr15:64522709(-) A-I      intronic chr15:64476712(-) A-I      intronic chr15:64574592(-) A-I      intronic chr15:64573927(-) A-I      intronic chr15:64476108(-) A-I      intronic chr15:64611860(-) A-I      intronic chr15:64522314(-) A-I      intronic chr15:64511858(-) A-I      intronic chr15:64481239(-) A-I      intronic chr15:64521087(-) A-I      intronic chr15:64521091(-) A-I      intronic chr15:64612770(-) A-I      intronic chr15:64486908(-) A-I      intronic chr15:64522249(-) A-I      intronic chr15:64471363(-) A-I      intronic chr15:64618500(-) A-I      intronic chr15:64618576(-) A-I      intronic chr15:64505186(-) A-I      intronic chr15:64611908(-) A-I      intronic chr15:64584861(-) A-I      intronic chr15:64638331(-) A-I      intronic chr15:64492433(-) A-I      intronic chr15:64644713(-) A-I      intronic chr15:64488762(-) A-I      intronic chr15:64645043(-) A-I      intronic chr15:64645760(-) A-I      intronic chr15:64518693(-) A-I      intronic chr15:64612815(-) A-I      intronic chr15:64523051(-) A-I      intronic chr15:64518553(-) A-I      intronic chr15:64488359(-) A-I      intronic chr15:64492431(-) A-I      intronic chr15:64517888(-) A-I      intronic chr15:64629662(-) A-I      intronic chr15:64593842(-) A-I      intronic chr15:64584141(-) A-I      intronic chr15:64517911(-) A-I      intronic chr15:64494840(-) A-I      intronic chr15:64518594(-) A-I      intronic chr15:64633081(-) A-I      intronic chr15:64569446(-) A-I      intronic chr15:64500861(-) A-I      intronic chr15:64638795(-) A-I      intronic chr15:64570744(-) A-I      intronic chr15:64635745(-) A-I      intronic chr15:64523456(-) A-I      intronic chr15:64522724(-) A-I      intronic chr15:64573820(-) A-I      intronic chr15:64542858(-) A-I      intronic chr15:64602875(-) A-I      intronic chr15:64574602(-) A-I      intronic chr15:64549809(-) A-I      intronic chr15:64643860(-) A-I      intronic chr15:64629761(-) A-I      intronic chr15:64492233(-) A-I      intronic chr15:64609385(-) A-I      intronic chr15:64482831(-) A-I      intronic chr15:64486965(-) A-I      intronic chr15:64518107(-) A-I      intronic chr15:64618663(-) A-I      intronic chr15:64523413(-) A-I      intronic chr15:64509928(-) A-I      intronic chr15:64478335(-) A-I      intronic chr15:64644683(-) A-I      intronic chr15:64644884(-) A-I      intronic chr15:64492669(-) A-I      intronic chr15:64615013(-) A-I      intronic chr15:64493440(-) A-I      intronic chr15:64478582(-) A-I      intronic chr15:64510229(-) A-I      intronic chr15:64638190(-) A-I      intronic chr15:64550576(-) A-I      intronic chr15:64522635(-) A-I      intronic chr15:64508308(-) A-I      intronic chr15:64602252(-) A-I      intronic chr15:64476115(-) A-I      intronic chr15:64547547(-) A-I      intronic chr15:64509893(-) A-I      intronic chr15:64494994(-) A-I      intronic chr15:64638839(-) A-I      intronic chr15:64512758(-) A-I      intronic chr15:64510311(-) A-I      intronic chr15:64490501(-) A-I      intronic chr15:64510874(-) A-I      intronic chr15:64484875(-) A-I      intronic chr15:64563351(-) A-I      intronic chr15:64574628(-) A-I      intronic chr15:64555565(-) A-I      intronic chr15:64645070(-) A-I      intronic chr15:64488321(-) A-I      intronic chr15:64569517(-) A-I      intronic chr15:64532350(-) A-I      intronic chr15:64550371(-) A-I      intronic chr15:64531715(-) A-I      intronic chr15:64512176(-) A-I      intronic chr15:64488767(-) A-I      intronic chr15:64522259(-) A-I      intronic chr15:64522676(-) A-I      intronic chr15:64584153(-) A-I      intronic chr15:64575971(-) A-I      intronic chr15:64629686(-) A-I      intronic chr15:64547414(-) A-I      intronic chr15:64583116(-) A-I      intronic chr15:64635249(-) A-I      intronic chr15:64570518(-) A-I      intronic chr15:64523463(-) A-I      intronic chr15:64568998(-) A-I      intronic chr15:64611900(-) A-I      intronic chr15:64615260(-) A-I      intronic chr15:64532250(-) A-I      intronic chr15:64510316(-) A-I      intronic chr15:64602304(-) A-I      intronic chr15:64507678(-) A-I      intronic chr15:64508342(-) A-I      intronic chr15:64522753(-) A-I      intronic chr15:64583051(-) A-I      intronic chr15:64491388(-) A-I      intronic chr15:64633061(-) A-I      intronic chr15:64631213(-) A-I      intronic chr15:64509837(-) A-I      intronic chr15:64512567(-) A-I      intronic chr15:64476816(-) A-I      intronic chr15:64486782(-) A-I      intronic chr15:64573288(-) A-I      intronic chr15:64610989(-) A-I      intronic chr15:64522585(-) A-I      intronic chr15:64632968(-) A-I      intronic chr15:64618839(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CSNK1G1	chr15:64511281(-) A-I intron -    22327324 chr15:64512370(-) A-I intron -    22028664 chr15:64512385(-) A-I intron -    22028664 chr15:64512390(-) A-I intron -    22028664 chr15:64512405(-) A-I intron -    22028664 chr15:64512418(-) A-I intron -    22028664 chr15:64512422(-) A-I intron -    22028664 chr15:64512431(-) A-I intron -    22028664 chr15:64512432(-) A-I intron -    22028664 chr15:64512442(-) A-I intron -    22028664 chr15:64512476(-) A-I intron -    22028664 chr15:64512488(-) A-I intron -    22028664 chr15:64512507(-) A-I intron -    22028664 chr15:64512512(-) A-I intron -    22028664 chr15:64512513(-) A-I intron -    22028664 chr15:64512526(-) A-I intron -    22028664 chr15:64512531(-) A-I intron -    22028664 chr15:64512550(-) A-I intron -    22028664 chr15:64512567(-) A-I intron -    22028664 chr15:64512569(-) A-I intron -    22028664 chr15:64512589(-) A-I intron -    22028664 chr15:64512649(-) A-I intron -    22028664 chr15:64512650(-) A-I intron -    22028664 chr15:64461528(-) G-A exon 3'UTR    21725310 chr15:64462252(-) T-G exon 3'UTR    21725310 chr15:64601397(-) A-G intron -    22484847 chr15:64607110(-) A-G intron -    22484847 chr15:64607112(-) A-G intron -    22484847 chr15:64635745(-) A-G intron -    22484847 chr15:64476816(-) A-G intron -    22484847 chr15:64488172(-) A-G intron -    22484847 chr15:64488211(-) A-G intron -    22484847 chr15:64488212(-) A-G intron -    22484847 chr15:64510229(-) A-G intron -    22484847 chr15:64510298(-) A-G intron -    22484847 chr15:64510316(-) A-G intron -    22484847 chr15:64511281(-) A-G intron -    22484847 chr15:64512758(-) A-G intron -    22484847 chr15:64517963(-) A-G intron -    22484847 chr15:64517964(-) A-G intron -    22484847 chr15:64518673(-) A-G intron -    22484847 chr15:64531777(-) A-G intron -    22484847 chr15:64563267(-) A-G intron -    22484847 chr15:64574602(-) A-G intron -    22484847 chr15:64587186(-) A-G intron -    22484847 chr15:64587187(-) A-G intron -    22484847 chr15:64587241(-) A-G intron -    22484847 chr15:64614796(-) A-G intron -    22484847 chr15:64614822(-) A-G intron -    22484847 chr15:64644837(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CSNK1G1	chr15:64458907-64458908(-) m6A 3'UTR//intron       - chr15:64458931-64458932(-) m6A 3'UTR//intron       - chr15:64458979-64458980(-) m6A 3'UTR//intron       - chr15:64459863-64459864(-) m6A 3'UTR//intron       27773535 chr15:64459917-64459918(-) m6A 3'UTR//intron       24981863//27773535 chr15:64459989-64459990(-) m6A 3'UTR//intron       24981863 chr15:64462550-64462551(-) m6A 3'UTR//intron       25456834//24981863//27773535//22608085 chr15:64462587-64462588(-) m6A 3'UTR//intron       25456834//24981863//27773535//22608085 chr15:64462606-64462607(-) m6A 3'UTR//intron       25456834//24981863//27773535//22608085 chr15:64462710-64462711(-) m6A 3'UTR//intron       24209618//24981863//27773535//22608085 chr15:64462812-64462813(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr15:64462836-64462837(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr15:64462843-64462844(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr15:64462882-64462883(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr15:64462941-64462942(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr15:64463008-64463009(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr15:64463022-64463023(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr15:64463047-64463048(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr15:64463062-64463063(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr15:64463148-64463149(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr15:64463168-64463169(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr15:64463189-64463190(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr15:64463239-64463240(-) m6A 3'UTR//intron       25456834//24981863//26404942//27773535//27371828//22608085 chr15:64463254-64463255(-) m6A 3'UTR//intron       24981863//27773535//27371828//22608085 chr15:64463346-64463347(-) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr15:64463352-64463353(-) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr15:64463358-64463359(-) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr15:64463394-64463395(-) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr15:64463427-64463428(-) m6A 3'UTR//intron       24284625//24981863//27773535 chr15:64463449-64463450(-) m6A 3'UTR//intron       24284625//24981863//27773535 chr15:64463515-64463516(-) m6A 3'UTR//intron       27773535 chr15:64463744-64463745(-) m6A 3'UTR//intron       24284625//24981863//26404942 chr15:64463815-64463816(-) m6A 3'UTR//intron       24284625//24981863//26404942 chr15:64463823-64463824(-) m6A 3'UTR//intron       24284625//24981863 chr15:64464001-64464002(-) m6A 3'UTR//intron       24981863 chr15:64464016-64464017(-) m6A 3'UTR//intron       25456834//24981863 chr15:64464046-64464047(-) m6A 3'UTR//intron       25456834//24981863 chr15:64464095-64464096(-) m6A 3'UTR//intron       24981863 chr15:64506127-64506128(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr15:64506146-64506147(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr15:64506164-64506165(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr15:64506172-64506173(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr15:64506200-64506201(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr15:64506207-64506208(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr15:64506261-64506262(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr15:64506291-64506292(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr15:64543777-64543778(-) m6A CDS//exon//intron       27773535 chr15:64551402-64551403(-) m6A CDS//exon//intron       27773535 chr15:64558077-64558078(-) m6A intron       27773535 chr15:64592537-64592538(-) m6A CDS//exon       27773535//22608085 chr15:64592575-64592576(-) m6A CDS//exon       24209618//27773535//22608085 chr15:64592650-64592651(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr15:64592658-64592659(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr15:64592665-64592666(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr15:64592693-64592694(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr15:64592715-64592716(-) m6A 5'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr15:64592774-64592775(-) m6A 5'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr15:64592808-64592809(-) m6A 5'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr15:64592828-64592829(-) m6A 5'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr15:64592868-64592869(-) m6A 5'UTR       24284625//24209618//24981863//26404942//27773535//22608085 chr15:64592894-64592895(-) m6A 5'UTR       24284625//24209618//24981863//27773535//22608085 chr15:64627988-64627989(-) m6A intron       - chr15:64634802-64634803(-) m6A intron       - chr15:64634877-64634878(-) m6A intron       22608085 chr15:64648190-64648191(-) m6A 5'UTR       24209618//24981863//27773535//27371828//22608085 chr15:64648228-64648229(-) m6A 5'UTR       24209618//24981863//27371828//22608085 chr15:64648276-64648277(-) m6A 5'UTR       24981863//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CSNK1G1	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-2-5p
Interactor2: CSNK1G1

Evidence Support:

Weak-Evidence	PAR-CLIP
Prediction-Evidence	cRep//miRanda//PARalyzer//Rep//Targetscan
Support Database	RepTar//ViRBase//VmiReg

References:

PMID	22100165	Target region	3'UTR
Source	RepTar//ViRBase//VmiReg	Interactor1 expression	None
Tissue or cell line	BC-1 cells	Interactor2 expression	None
Description	Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites.Clusters with seed matches to expressed miRNAs were considered candidate target sites. Of the clusters mapping to human 3'UTRs, 69% (BC-1) and 70% (BC-3) had seed matches to expressed miRNAs (Tables S6).Table S6A BC-1 derived 3'UTR clusters with seed matches to expressed miRNAs.