Detail Information

Basic Information:


  VIRBase ID:  

VHID00436878

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.9942

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-1-5p H3P16
miRBase
Accession/Entrez ID
MIMAT0002182 644914
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA pseudo
Alias - H3F3AP6//p21

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate H3P16
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-1-5p
Interactor2: H3P16

Evidence Support:


Strong-Evidence 3'UTR indicator assay//Dual luciferase reporter assay//RT-PCR//Western blot
Weak-Evidence HITS-CLIP//PAR-CLIP
Prediction-Evidence cRep//miRanda//PARalyzer//Rep//Targetscan
Support Database RepTar//ViRBase//VIRmiRNA//VmiReg

References:


[1]PMID 20580307 Target region 3'UTR
Source RepTar//ViRBase Interactor1 expression None
Tissue or cell line 293T cells//BC-3 cells//BL40 cells//PEL cells//U2OS cells Interactor2 expression Downregulation
Description From the targets identified to date (Table 1, Figure 1) it is apparent that viral miRNAs play an important role in immune evasion by inhibiting immune surveillance and extending the life of the infected host cell. Table 1 Immunomodulatory viral miRNAs.
[2]PMID 21152115 Target region 3'UTR
Source RepTar//ViRBase Interactor1 expression None
Tissue or cell line 293T cells//BC-3 cells//BL40 cells//PEL cells//U2OS cells Interactor2 expression Downregulation
Description More studies from recent reports indicate miR-K12-5, miR-K12-9 and miR-K12-10 repression of Bcl-2-associated transcription factor 1, an apoptosis-inducing factor (238), miR-K12-3 reduction of LRRC8D (leucine rich repeat containing 8 family, member D), a leucin-rich type III transmembrane protein involved in proliferation and activation of lymphocytes, NHP2L1 (non-histone chromosome protein 2-like 1) (239), and a transcription factor NFIB (240), miR-K12-1 inhibition of p21 (241) and NFkappaB inhibitor IkappaBalpha (242), miR-K12-4-3p suppression of GEMIN8 (239), miR-K12-10a reduction of TWEAKR (243), miR-K12-1, -6, and -11 decrease of MAF (musculoaponeurotic fibrosarcoma oncogene homolog) (244), K12-4-5p targeting retinoblastoma (Rb)-like protein 2 (Rbl2) and miR-K12-5 and -9*suppressing ORF50 mRNA (245,246).
[3]PMID 20219912 Target region 3'UTR
Source RepTar//ViRBase//VIRmiRNA//VmiReg Interactor1 expression None
Tissue or cell line 293T cells//BC-3 cells//BL40 cells//PEL cells//U2OS cells Interactor2 expression Downregulation
Description Here, we report that cellular mRNAs encoding the cellular cyclin-dependent kinase inhibitor p21, a key inducer of cell cycle arrest, are direct targets for KSHV miR-K1. Ectopically expressed KSHV miR-K1 specifically inhibited the expression of endogenous p21 in KSHV-negative cells and strongly attenuated the cell cycle arrest that normally occurs upon p53 activation.

Starting a new search, please wait ...