Detail Information

Basic Information:


  VIRBase ID:  

VHID00433426

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-1-5p:           CDKL2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-1-5p CDKL2
miRBase
Accession/Entrez ID		 MIMAT0002182 8999
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA mRNA
Alias - KKIAMRE//P56

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CDKL2
chr4:76518590(-) A-I      intronic
chr4:76518602(-) A-I      intronic
chr4:76551945(-) A-I      intronic
chr4:76518608(-) A-I      intronic
chr4:76551947(-) A-I      intronic
chr4:76551989(-) A-I      intronic
chr4:76518607(-) A-I      intronic
chr4:76546858(-) A-I      intronic
chr4:76546844(-) A-I      intronic
chr4:76546835(-) A-I      intronic
chr4:76546149(-) A-I      intronic
chr4:76541080(-) A-I      intronic
chr4:76541075(-) A-I      intronic
chr4:76538119(-) A-I      intronic
chr4:76538109(-) A-I      intronic
chr4:76521050(-) A-I      intronic
chr4:76521013(-) A-I      intronic
chr4:76520931(-) A-I      intronic
chr4:76520612(-) A-I      intronic
chr4:76519235(-) A-I      intronic
chr4:76519208(-) A-I      intronic
chr4:76519207(-) A-I      intronic
chr4:76516740(-) A-I      intronic
chr4:76516739(-) A-I      intronic
chr4:76506091(-) A-I      intronic
chr4:76506087(-) A-I      intronic
chr4:76519200(-) A-I      intronic
chr4:76519260(-) A-I      intronic
chr4:76518569(-) A-I      intronic
chr4:76518571(-) A-I      intronic
chr4:76518579(-) A-I      intronic
chr4:76519236(-) A-I      intronic
chr4:76519246(-) A-I      intronic
chr4:76519247(-) A-I      intronic
chr4:76546860(-) A-I      intronic
chr4:76518614(-) A-I      intronic
chr4:76519264(-) A-I      intronic
chr4:76506094(-) A-I      intronic
chr4:76519191(-) A-I      intronic
chr4:76506089(-) A-I      intronic
chr4:76551931(-) A-I      intronic
chr4:76551935(-) A-I      intronic
chr4:76519254(-) A-I      intronic
chr4:76520598(-) A-I      intronic
chr4:76512498(-) A-I      intronic
chr4:76520563(-) A-I      intronic
chr4:76510959(-) A-I      intronic
chr4:76505436(-) A-I      intronic
chr4:76510675(-) A-I      intronic
chr4:76536521(-) A-I      intronic
chr4:76510905(-) A-I      intronic
chr4:76515256(-) A-I      intronic
chr4:76512452(-) A-I      intronic
chr4:76520671(-) A-I      intronic
chr4:76516615(-) A-I      intronic
chr4:76505765(-) A-I      intronic
chr4:76534012(-) A-I      intronic
chr4:76520559(-) A-I      intronic
chr4:76541092(-) A-I      intronic
chr4:76520484(-) A-I      intronic
chr4:76512551(-) A-I      intronic
chr4:76506183(-) A-I      intronic
chr4:76515084(-) A-I      intronic
chr4:76520465(-) A-I      intronic
chr4:76515291(-) A-I      intronic
chr4:76520649(-) A-I      intronic
chr4:76543043(-) A-I      intronic
chr4:76512612(-) A-I      intronic
chr4:76545172(-) A-I      intronic
chr4:76505338(-) A-I      intronic
chr4:76520991(-) A-I      intronic
chr4:76515823(-) A-I      intronic
chr4:76505924(-) A-I      intronic
chr4:76535131(-) A-I      intronic
chr4:76511682(-) A-I      intronic
chr4:76505673(-) A-I      intronic
chr4:76512501(-) A-I      intronic
chr4:76505940(-) A-I      intronic
chr4:76512453(-) A-I      intronic
chr4:76515071(-) A-I      intronic
chr4:76510886(-) A-I      intronic
chr4:76515251(-) A-I      intronic
chr4:76515066(-) A-I      intronic
chr4:76552983(-) A-I      intronic
chr4:76510702(-) A-I      intronic
chr4:76505619(-) A-I      intronic
chr4:76505830(-) A-I      intronic
chr4:76538290(-) A-I      intronic
chr4:76510874(-) A-I      intronic
chr4:76520674(-) A-I      intronic
chr4:76520492(-) A-I      intronic
chr4:76520594(-) A-I      intronic
chr4:76505631(-) A-I      intronic
chr4:76520510(-) A-I      intronic
chr4:76552275(-) A-I      intronic
chr4:76543102(-) A-I      intronic
chr4:76510756(-) A-I      intronic
chr4:76511669(-) A-I      intronic
chr4:76546313(-) A-I      intronic
chr4:76505693(-) A-I      intronic
chr4:76505278(-) A-I      intronic
chr4:76506191(-) A-I      intronic
chr4:76510530(-) A-I      intronic
chr4:76515054(-) A-I      intronic
chr4:76505858(-) A-I      intronic
chr4:76520859(-) A-I      intronic
chr4:76505710(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CDKL2
chr4:76555117(-) G-A intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CDKL2
chr4:76503501-76503502(-) m6A 3'UTR       22608085
chr4:76503548-76503549(-) m6A 3'UTR       22608085
chr4:76503563-76503564(-) m6A 3'UTR       22608085
chr4:76503582-76503583(-) m6A 3'UTR       22608085
chr4:76503675-76503676(-) m6A 3'UTR       22608085
chr4:76503703-76503704(-) m6A 3'UTR       22608085
chr4:76504156-76504157(-) m6A 3'UTR       22608085
chr4:76504217-76504218(-) m6A 3'UTR       22608085
chr4:76504245-76504246(-) m6A 3'UTR       22608085
chr4:76504251-76504252(-) m6A 3'UTR       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CDKL2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-1-5p
Interactor2: CDKL2

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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